RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 B4GALT1P15291 398 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
SMC1A-204ENST00000463684 CRISP3P54108 245 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 KLF3P57682 345 aaPredicted RBP12.34□□□□□ -0.43
SMC1A-204ENST00000463684 LRRC74AQ0VAA2 488 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 CAMK2DQ13557 499 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 RAB39AQ14964 217 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 MFSD13AQ14CX5 517 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 HFEQ30201 348 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 C5orf46Q6UWT4 87 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 SERPINA11Q86U17 422 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 OR6N1Q8NGY5 312 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 TCP10LQ8TDR4 215 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 DVL3Q92997 716 aaPredicted RBP12.34□□□□□ -0.43
SMC1A-204ENST00000463684 SLC38A4Q969I6 547 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 TAAR8Q969N4 342 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 FOXB1Q99853 325 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 SPATA9Q9BWV2 254 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 ULBP2Q9BZM5 246 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 MED29Q9NX70 200 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 OPN4Q9UHM6 478 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 WIPI2Q9Y4P8 454 aa12.34□□□□□ -0.43
SMC1A-204ENST00000463684 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
SMC1A-204ENST00000463684 SPAG7O75391 227 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 CLPTM1O96005 669 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 FSHBP01225 129 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 MT-ND5P03915 603 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 SERPINA5P05154 406 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 CBLP22681 906 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.44
SMC1A-204ENST00000463684 GRPRP30550 384 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 LCN2P80188 198 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 BAMBIQ13145 260 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 MAPK11Q15759 364 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 MOGQ16653 247 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 DOK3Q7L591 496 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 LRRC58Q96CX6 371 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 OR52E6Q96RD3 313 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 GAL3ST1Q99999 423 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 RHOXF2Q9BQY4 288 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 SLITRK2Q9H156 845 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 IFT52Q9Y366 437 aa12.33□□□□□ -0.44
SMC1A-204ENST00000463684 TRAV36DV7A0A075B6V5 113 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 A0A0G2JPF8 293 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 TMEM247A6NEH6 219 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 DNAJC9-AS1A6NH13 148 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 HNRNPCL2B2RXH8 293 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 HNRNPCL3B7ZW38 293 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 MS4A18H0YCH9 400 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 HNRNPCL1O60812 293 aaKnown RBP12.32□□□□□ -0.44
SMC1A-204ENST00000463684 FZD7O75084 574 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 ENTPD5O75356 428 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 LCKP06239 509 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 BCHEP06276 602 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 BPGMP07738 259 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 MYZAPP0CAP1 466 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 FAM157BP0CG42 384 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 HNRNPCL4P0DMR1 293 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 LBPP18428 481 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 CDKN2CP42773 168 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 CRATP43155 626 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 RBBP4Q09028 425 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 MS4A18Q3C1V0 323 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 ARMCX4Q5H9R4 360 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 USP51Q70EK9 711 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 PIWIL3Q7Z3Z3 882 aaKnown RBP12.32□□□□□ -0.44
SMC1A-204ENST00000463684 MIER2Q8N344 545 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 ADPRHL1Q8NDY3 354 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 SLC25A28Q96A46 364 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 SAP30LQ9HAJ7 183 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 C12orf10Q9HB07 376 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF224Q9NZL3 707 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 NUP50Q9UKX7 468 aa12.32□□□□□ -0.44
SMC1A-204ENST00000463684 IGLV3-9A0A075B6K5 115 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF250P15622 560 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 DRD4P21917 467 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ATP4BP51164 291 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 NME5P56597 212 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 HOXC5Q00444 222 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 TSTQ16762 297 aaKnown RBP12.31□□□□□ -0.44
SMC1A-204ENST00000463684 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF584Q8IVC4 421 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 WDFY1Q8IWB7 410 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF519Q8TB69 540 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 SLC38A5Q8WUX1 472 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms