RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 EPGNQ6UW88 154 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 GLCCI1Q86VQ1 547 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 ARMC8Q8IUR7 673 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 SLC41A3Q96GZ6 507 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 FOXB1Q99853 325 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 MED29Q9NX70 200 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 B3GNT2Q9NY97 397 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 MRPL39Q9NYK5 338 aaKnown RBP13.28□□□□□ -0.28
SKA3-204ENST00000462482 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 GPR160Q9UJ42 338 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 ZNF346Q9UL40 294 aaKnown RBP13.28□□□□□ -0.28
SKA3-204ENST00000462482 ANGPT4Q9Y264 503 aa13.28□□□□□ -0.28
SKA3-204ENST00000462482 ZNF503-AS2A6NEH8 195 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 B4DSR2 109 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 ERLIN1O75477 346 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 HPRP00739 348 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 MT-ATP6P00846 226 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 BGLAPP02818 100 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 HLA-DOBP13765 273 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 B4GALT1P15291 398 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 GLRXP35754 106 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 GPR6P46095 362 aaPredicted RBP13.27□□□□□ -0.29
SKA3-204ENST00000462482 GIPRP48546 466 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 DVL1P1P54792 670 aaPredicted RBP13.27□□□□□ -0.29
SKA3-204ENST00000462482 RAB1AP62820 205 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 CAMK2DQ13557 499 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 RIN1Q13671 783 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 CCNIQ14094 377 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 BLOC1S3Q6QNY0 202 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 HIPK4Q8NE63 616 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 RDH5Q92781 318 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 SOX7Q9BT81 388 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 TMEM43Q9BTV4 400 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 MRPL37Q9BZE1 423 aaKnown RBP13.27□□□□□ -0.29
SKA3-204ENST00000462482 TMEM38AQ9H6F2 299 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
SKA3-204ENST00000462482 A0A0B4J2E0 115 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 A0A1B0GX12 115 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 A0A1W2PPW3 197 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 LYNX1G3V0Z9 82 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 TPST1O60507 370 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
SKA3-204ENST00000462482 ADORA3P0DMS8 318 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 LYNX1P0DP58 116 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 AQP1P29972 269 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 IL2RGP31785 369 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 MRPL19P49406 292 aaKnown RBP13.26□□□□□ -0.29
SKA3-204ENST00000462482 AQP5P55064 265 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 GLIPR1L2Q4G1C9 344 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 PHYHD1Q5SRE7 291 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 RINLQ6ZS11 566 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 ZNF627Q7L945 461 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
SKA3-204ENST00000462482 OR5J2Q8NH18 312 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 LRRC8CQ8TDW0 803 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 C7orf26Q96N11 449 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 SYT3Q9BQG1 590 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 OCEL1Q9H607 264 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 SLC7A8Q9UHI5 535 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
SKA3-204ENST00000462482 SLC22A23A1A5C7 686 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 C11orf98E9PRG8 122 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 PLPP3O14495 311 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 ZNF35P13682 527 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 ZNF14P17017 642 aaPredicted RBP13.25□□□□□ -0.29
SKA3-204ENST00000462482 HOXB9P17482 250 aaPredicted RBP13.25□□□□□ -0.29
SKA3-204ENST00000462482 TCN1P20061 433 aaPredicted RBP13.25□□□□□ -0.29
SKA3-204ENST00000462482 ACHEP22303 614 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 CDH12P55289 794 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 BIDP55957 195 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 TRIP10Q15642 601 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 ZNF613Q6PF04 617 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 SHQ1Q6PI26 577 aaKnown RBP13.25□□□□□ -0.29
SKA3-204ENST00000462482 HIST3H2AQ7L7L0 130 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 MSRB3Q8IXL7 192 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 HIST1H2ACQ93077 130 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 MOGAT1Q96PD6 335 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 MCHR1Q99705 422 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 CCDC28BQ9BUN5 200 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 ZNF416Q9BWM5 594 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 GRIP1Q9Y3R0 1128 aa13.25□□□□□ -0.29
SKA3-204ENST00000462482 RNF13O43567 381 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 FMO6PO60774 539 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TFP02787 698 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 SAGP10523 405 aaPredicted RBP13.24□□□□□ -0.29
SKA3-204ENST00000462482 ITGA2P17301 1181 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 ALDH3B1P43353 468 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 IDH3AP50213 366 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 TMEM33P57088 247 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 RAB39AQ14964 217 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 CYP51A1Q16850 503 aa13.24□□□□□ -0.29
SKA3-204ENST00000462482 NKPD1Q17RQ9 610 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms