RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ALKBH1Q13686 389 aaKnown RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SLC35D3Q5M8T2 416 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 ADGRG3Q86Y34 549 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 ABHD4Q8TB40 342 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TIMD4Q96H15 378 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SLC2A8Q9NY64 477 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 DUOX1Q9NRD9 1551 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 KIR2DS1A0A191URI9 304 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM72A0PK05 275 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 M0QZQ0 153 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 GPR171O14626 319 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 HSD17B6O14756 317 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TCRBP04435 133 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF93P35789 620 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 KIR2DS4P43632 304 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 GABREP78334 506 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 C17orf67Q0P5P2 114 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 KIR2DS1Q14954 304 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 RPE65Q16518 533 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SYPL1Q16563 259 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 KCTD11Q693B1 232 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 DPY19L2P2Q6ZN68 376 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM178AQ8NBL3 297 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR1M1Q8NGA1 313 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR6K3Q8NGY3 331 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR2AE1Q8NHA4 323 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 DPF1Q92782 380 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 GATA6Q92908 595 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 FER1L6-AS2Q96M78 137 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 RNF32Q9H0A6 362 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 C20orf85Q9H1P6 137 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 LRIT1Q9P2V4 623 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 MROH1Q8NDA8 1641 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 ADAM12O43184 909 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 LALBAP00709 142 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 C21orf33P30042 268 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 GGTA1PQ4G0N0 100 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR2G6Q5TZ20 316 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SLC24A4Q8NFF2 622 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TOE1Q96GM8 510 aaKnown RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SOX7Q9BT81 388 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 EPHX3Q9H6B9 360 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TAF9BQ9HBM6 251 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 RYDENQ9NUL5 291 aaKnown RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 DIMT1Q9UNQ2 313 aaKnown RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR6C68A6NDL8 312 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 OR6C76A6NM76 312 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 FZD9O00144 591 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 CTDSP2O14595 271 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 FABP7O15540 132 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 AIFM1O95831 613 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 GLAP06280 429 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 CBR1P16152 277 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 CARD18P57730 90 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 RPS23P62266 143 aaKnown RBP8.33□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF718Q3SXZ3 478 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 C9orf152Q5JTZ5 239 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 MARCH8Q5T0T0 291 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 USP51Q70EK9 711 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 PCYT2Q99447 389 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 TMED7-TICAM2A0A0A6YYA0 188 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 XRCC3O43542 346 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 SCRG1O75711 98 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 PMP2P02689 132 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 CXCL12P48061 93 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 TPMTP51580 245 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 NRARPQ7Z6K4 114 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM104Q8NE00 496 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 MDGA1Q8NFP4 955 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 GHSRQ92847 366 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM106AQ96A25 262 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 C14orf79Q96F83 325 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 UQCC2Q9BRT2 126 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 CHRDL1Q9BU40 450 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 ULBP3Q9BZM4 244 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 RIMS4Q9H426 269 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 OBP2AQ9NY56 170 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 GMPR2Q9P2T1 348 aaKnown RBP8.32□□□□□ -1.08
BRCA1-205ENST00000461221 TMED7Q9Y3B3 224 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 SH2D7A6NKC9 451 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-205ENST00000461221 P2RY10O00398 339 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 ADRA2CP18825 462 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 DUSP1P28562 367 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 CD38P28907 300 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 HTR1FP30939 366 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 BIDP55957 195 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 LCN6P62502 163 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 MANEAQ5SRI9 462 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 ADIPOR2Q86V24 386 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 PDLIM5Q96HC4 596 aaKnown RBP8.32□□□□□ -1.08
BRCA1-205ENST00000461221 SORT1Q99523 831 aa8.32□□□□□ -1.08
BRCA1-205ENST00000461221 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms