RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 F13BP05160 661 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 ALPLP05186 524 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 ZNF3P17036 446 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 BMP5P22003 454 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 PRKACGP22612 351 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 CRABP1P29762 137 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 OR3A2P47893 321 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 HSPA13P48723 471 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 CSNK1A1P48729 337 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 PCYT1AP49585 367 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 P2RY4P51582 365 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 BLVRAP53004 296 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 CRISP1P54107 249 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 SH3BGRP55822 239 aaPredicted RBP9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 CDC42P60953 191 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 MYBPC1Q00872 1141 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 STK11Q15831 433 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 ACKR1Q16570 336 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 SLC36A3Q495N2 470 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 THEM4Q5T1C6 240 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 TTC23Q5W5X9 447 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 FBXW9Q5XUX1 488 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 HMBOX1Q6NT76 420 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 NIPAL3Q6P499 406 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 KLHL17Q6TDP4 642 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 MRGPRGQ86SM5 289 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 KIF18BQ86Y91 864 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 GCNT2Q8N0V5 402 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 DEPDC4Q8N2C3 294 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 ERMAPQ96PL5 475 aaPredicted RBP9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 SNX18Q96RF0 628 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 NIPSNAP1Q9BPW8 284 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 KATNB1Q9BVA0 655 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 LINC00470Q9BZP3 86 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 SLCO5A1Q9H2Y9 848 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 SMURF2Q9HAU4 748 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 MCCC2Q9HCC0 563 aa9.79□□□□□ -0.84
SMNDC1-203ENST00000460483 BOD1L1Q8NFC6 3051 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 A0A0G2JNJ9 132 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 SLC35F4A4IF30 521 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 EEF1E1-BLOC1S5C9J1V9 151 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 ZNF587BE7ETH6 402 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 EEF1E1O43324 174 aaKnown RBP9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 MPZL2O60487 215 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 TXNDC12O95881 172 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 ACADSP16219 412 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 HOXC12P31275 282 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 ACVR1BP36896 505 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 GIPRP48546 466 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 DAPP51397 102 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 ZNF84P51523 738 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 BIDP55957 195 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 SIRPAP78324 504 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 NPRL3Q12980 569 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 CLEC12AQ5QGZ9 265 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 OR7E24Q6IFN5 339 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 Q6ZT83 130 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 TMEM179BQ7Z7N9 219 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 EPHX4Q8IUS5 362 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 CCDC36Q8IYA8 594 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 KDM8Q8N371 416 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 LNX2Q8N448 690 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 LILRB4Q8NHJ6 448 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 MOSPD2Q8NHP6 518 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 TRUB1Q8WWH5 349 aaKnown RBP9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 CCDC120Q96HB5 630 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 SAMD8Q96LT4 415 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 APOL4Q9BPW4 351 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 ENKD1Q9H0I2 346 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 IMPAD1Q9NX62 359 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 SMPD3Q9NY59 655 aaPredicted RBP9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 B3GAT1Q9P2W7 334 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 Q9UFV3 132 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 CLEC4AQ9UMR7 237 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 NINQ8N4C6 2090 aa9.78□□□□□ -0.84
SMNDC1-203ENST00000460483 PDLIM1O00151 329 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 ZNHIT1O43257 154 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 ARHGEF9O43307 516 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 TRAF3IP2O43734 574 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 TNFSF13O75888 250 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 FARS2O95363 451 aaKnown RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 PPP3CBP16298 524 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 GRK5P34947 590 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 KIR2DL2P43627 348 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 ASCL1P50553 236 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 ERVK-25P63136 954 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 LGALS3BPQ08380 585 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 CD47Q08722 323 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 TOP3AQ13472 1001 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 KRR1Q13601 381 aaKnown RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 GINS1Q14691 196 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 PTGES3Q15185 160 aaKnown RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 GUSBP1Q15486 140 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 SNCBQ16143 134 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 NRN1LQ496H8 165 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 OGFRL1Q5TC84 451 aaPredicted RBP9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 SEM1Q6ZVN7 128 aa9.77□□□□□ -0.85
SMNDC1-203ENST00000460483 DPPA2Q7Z7J5 298 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms