RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PRR22Q8IZ63 422 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 LINC00471Q8N535 108 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 DMBX1Q8NFW5 382 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 OR5T1Q8NG75 326 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 OR4K5Q8NGD3 323 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 OR4C3Q8NH37 302 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 LINC00052Q96N35 136 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 APOL4Q9BPW4 351 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 GABARAPL3Q9BY60 117 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 YTHDF1Q9BYJ9 559 aaKnown RBP9.46□□□□□ -0.89
HERC4-207ENST00000460168 GSX1Q9H4S2 264 aaPredicted RBP9.46□□□□□ -0.89
HERC4-207ENST00000460168 PLSCR4Q9NRQ2 329 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 ZFP57Q9NU63 452 aa9.46□□□□□ -0.89
HERC4-207ENST00000460168 H2AFY2Q9P0M6 372 aaPredicted RBP9.46□□□□□ -0.89
HERC4-207ENST00000460168 SLC22A23A1A5C7 686 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 NPIPB9F8W1W9 429 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 SLC25A17O43808 307 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 CSO75390 466 aaKnown RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 REM1O75628 298 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 CSTAP01040 98 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 IFNA10P01566 189 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 ELK4P28324 431 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 FGFBP1Q14512 234 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 ZNF674Q2M3X9 581 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 PGBD2Q6P3X8 592 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 DHRS13Q6UX07 377 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 ZNF730Q6ZMV8 503 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 CPEB2Q7Z5Q1 589 aaKnown RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 SYT14Q8NB59 555 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 MAFIPQ8WZ33 124 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 C8orf44Q96CB5 159 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 BSCL2Q96G97 398 aaPredicted RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 SLC41A3Q96GZ6 507 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 ADOQ96SZ5 270 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 FUZQ9BT04 418 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 PARD6AQ9NPB6 346 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 ABCB10Q9NRK6 738 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 UBQLN4Q9NRR5 601 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 FAM86C1Q9NVL1 165 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 TAS2R3Q9NYW6 316 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 TESQ9UGI8 421 aaKnown RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 NDRG4Q9ULP0 352 aaKnown RBP9.46□□□□□ -0.9
HERC4-207ENST00000460168 SLC7A7Q9UM01 511 aa9.46□□□□□ -0.9
HERC4-207ENST00000460168 EP300Q09472 2414 aaPredicted RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 A0A087WUU8 490 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 MEX3AA1L020 520 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 J3QW42 95 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 SCDO00767 359 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 LRP3O75074 770 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 STK17BO94768 372 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 PLATP00750 562 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 CYC1P08574 325 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 SNRNP70P08621 437 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 ISL1P61371 349 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 PLCXD2Q0VAA5 305 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 TOMM34Q15785 309 aaPredicted RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 MICBQ29980 383 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 VASNQ6EMK4 673 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 LAMTOR1Q6IAA8 161 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 FAM198BQ6UWH4 519 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 HSDL2Q6YN16 418 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 GDF7Q7Z4P5 450 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 CMIPQ8IY22 773 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 ZNF561Q8N587 486 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 ARRDC1Q8N5I2 433 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 APCDD1LQ8NCL9 501 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 RPL3LQ92901 407 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 ARSGQ96EG1 525 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 WBP1Q96G27 269 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 LIN37Q96GY3 246 aaPredicted RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 HRASLS5Q96KN8 279 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 DCLRE1CQ96SD1 692 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 PRRX2Q99811 253 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 EVA1AQ9H8M9 152 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 RANGRFQ9HD47 186 aaPredicted RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 PTRH2Q9Y3E5 179 aaKnown RBP9.45□□□□□ -0.9
HERC4-207ENST00000460168 U3KQ87 197 aa9.45□□□□□ -0.9
HERC4-207ENST00000460168 A0A1W2PN81 502 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TRAPPC13A5PLN9 417 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 SERINC4A6NH21 518 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 A8MV72 311 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 H3BN98 237 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TO15178 435 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 FMO6PO60774 539 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 RLN2P04090 185 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 OR8G3PP0DMU2 310 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 HTR2AP28223 471 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 CHRNA7P36544 502 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 IFNGR2P38484 337 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 IDH2P48735 452 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms