RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 NPIPA2E9PIF3 369 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 NPIPA3F8WFD2 350 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
SYT1-204ENST00000457153 RGS13O14921 159 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 ARPC5O15511 151 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 HTR2AP28223 471 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 HTR2CP28335 458 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 VEGFCP49767 419 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 PRKXP51817 358 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
SYT1-204ENST00000457153 ABI3Q9P2A4 366 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 FRG2CA6NGY1 282 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 TSPAN4O14817 238 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 MSL3P1P0C860 447 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 P2RX1P51575 399 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 TAS2R31P59538 309 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 CYCSP99999 105 aaKnown RBP12.86□□□□□ -0.35
SYT1-204ENST00000457153 SGCAQ16586 387 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 C1orf140Q5VVS0 124 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 OR6M1Q8NGM8 313 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
SYT1-204ENST00000457153 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 CCDC88CQ9P219 2028 aa12.86□□□□□ -0.35
SYT1-204ENST00000457153 LOC100289279A0A1B0GTE1 492 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 OR6C76A6NM76 312 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 CBX7O95931 251 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PTGS2P35354 604 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 GPLD1P80108 840 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 FUT5Q11128 374 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PRSS45Q7RTY3 260 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 OR13C5Q8NGS8 318 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 OR5H6Q8NGV6 325 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 ST6GAL2Q96JF0 529 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 JAM3Q9BX67 310 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 SSX4O60224 188 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 RAD1O60671 282 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 ZFAND5O76080 213 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 RPL18Q07020 188 aaKnown RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 SLC25A35Q3KQZ1 300 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 AWAT2Q6E213 333 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PM20D2Q8IYS1 436 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 C10orf90Q96M02 699 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PHB2Q99623 299 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 DHCR7Q9UBM7 475 aaKnown RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 KLF15Q9UIH9 416 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 MRPS2Q9Y399 296 aaKnown RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 A0A1B0GX78 115 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 HRO43593 1189 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 CRYZL1O95825 349 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 ZNF136P52737 540 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYT1-204ENST00000457153 DMKNQ6E0U4 476 aaPredicted RBP12.85□□□□□ -0.35
SYT1-204ENST00000457153 SLC35D2Q76EJ3 337 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PRSS41Q7RTY9 318 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 OR52I2Q8NH67 350 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 TM4SF19Q96DZ7 209 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 FBXO34Q9NWN3 711 aa12.85□□□□□ -0.35
SYT1-204ENST00000457153 PRICKLE3O43900 615 aaPredicted RBP12.84□□□□□ -0.35
SYT1-204ENST00000457153 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
SYT1-204ENST00000457153 POU3F1Q03052 451 aaPredicted RBP12.84□□□□□ -0.35
SYT1-204ENST00000457153 HTR4Q13639 388 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 CD200R1LQ6Q8B3 271 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 MRGPREQ86SM8 312 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 FAM3DQ96BQ1 224 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 FGF21Q9NSA1 209 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 CYR61O00622 381 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 SLC26A5P58743 744 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 GK2Q14410 553 aaPredicted RBP12.84□□□□□ -0.35
SYT1-204ENST00000457153 ISXQ2M1V0 245 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 ABCA11PQ4W5N1 156 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 APOBEC4Q8WW27 367 aaKnown RBP12.84□□□□□ -0.35
SYT1-204ENST00000457153 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 SLC6A15Q9H2J7 730 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 TMEM185BQ9H7F4 350 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 NTMQ9P121 344 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 H3BML4 177 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 UBCP0CG48 685 aaKnown RBP12.84□□□□□ -0.35
SYT1-204ENST00000457153 CBX5P45973 191 aa12.84□□□□□ -0.35
SYT1-204ENST00000457153 DOC2BQ14184 412 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms