RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IFNL4K9M1U5 179 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 M0QYT0 321 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SULT1C2O00338 296 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 BTN3A3O00478 584 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 UBDO15205 165 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 RP2O75695 350 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR2J2O76002 312 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 TDP2O95551 362 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 TTC4O95801 387 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 PAK4O96013 591 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 AMY1AP04745 511 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 HOXD4P09016 255 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR10J4P0C629 311 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR8U9P0C7N5 309 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 METTL15P1P0C7V9 234 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 C1GALT1C1LP0DN25 315 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 MYOGP15173 224 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ZNF23P17027 643 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ZNF25P17030 456 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 SERPINA2P20848 420 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 GKP32189 559 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CDAP32320 146 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 RPS9P46781 194 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 RGRP47804 291 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 MTHFSP49914 203 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 PDLIM4P50479 330 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 TNFSF10P50591 281 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 EFNA5P52803 228 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 MVDP53602 400 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ERVK11-1P61568 191 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 HMGCS1Q01581 520 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 MAPK14Q16539 360 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ACKR1Q16570 336 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CYP51A1Q16850 503 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 MST1LQ2TV78 715 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SPDYE7PQ495Y7 208 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 GLYR1Q49A26 553 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 CDNFQ49AH0 187 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SIRPB2Q5JXA9 342 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SAMD4BQ5PRF9 694 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 UTF1Q5T230 341 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 AGAP7PQ5VUJ5 663 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 FBXW9Q5XUX1 488 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ZNF790Q6PG37 636 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 FAM198BQ6UWH4 519 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SIGLEC15Q6ZMC9 328 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 GCNT7Q6ZNI0 430 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ZNF621Q6ZSS3 439 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ZNF767PQ75MW2 155 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SSX7Q7RTT5 188 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CPEB2Q7Z5Q1 589 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 MRPL52Q86TS9 123 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 C10orf107Q8IVU9 208 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CENPSQ8N2Z9 138 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 C8orf31Q8N9H6 132 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SLC38A9Q8NBW4 561 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 FAM98AQ8NCA5 519 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 REPS2Q8NFH8 660 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR1M1Q8NGA1 313 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR52L2PQ8NGH6 319 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR51G2Q8NGK0 314 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR10K1Q8NGX5 313 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 OR10X1Q8NGY0 326 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CD99L2Q8TCZ2 262 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CD200R1Q8TD46 325 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 C1orf54Q8WWF1 131 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 FCAMRQ8WWV6 532 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 RPL3LQ92901 407 aaKnown RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 FAM136AQ96C01 138 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 C8orf44Q96CB5 159 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 JSRP1Q96MG2 331 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 MYADMQ96S97 322 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 COPS8Q99627 209 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 RAB34Q9BZG1 259 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 WWTR1Q9GZV5 400 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ILKAPQ9H0C8 392 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 C6orf50Q9HD87 102 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 Q9N2J8 555 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 EQTNQ9NQ60 294 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 KIAA1456Q9P272 454 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 CLN8Q9UBY8 286 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 POU2F3Q9UKI9 436 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 IKZF2Q9UKS7 526 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 ATG4BQ9Y4P1 393 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 HEMK1Q9Y5R4 338 aaPredicted RBP4.87□□□□□ -1.63
VPS41-209ENST00000457055 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 SPEF2Q9C093 1822 aa4.87□□□□□ -1.63
VPS41-209ENST00000457055 A0A087X0K7 114 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 hCG_38984A0A1B0GV85 526 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CCDC160A6NGH7 325 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CXorf49A8MYA2 514 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZBTB5O15062 677 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 AIREO43918 545 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 HSBP1O75506 76 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 KHDRBS3O75525 346 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms