RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 GASTP01350 101 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 COX6B1P14854 86 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 MPGP29372 298 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 DNAJA1P31689 397 aaKnown RBP12.44□□□□□ -0.42
SMPD4-215ENST00000457039 RUNX1T1Q06455 604 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 CAMK2DQ13557 499 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 TAF11Q15544 211 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 TSC22D1Q15714 1073 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 ATP6AP1Q15904 470 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 IGFN1Q86VF2 1251 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 OR10G2Q8NGC3 310 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 KISS1RQ969F8 398 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-215ENST00000457039 SLC25A44Q96H78 314 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-215ENST00000457039 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 DGCR6LQ9BY27 220 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 MRPL13Q9BYD1 178 aaKnown RBP12.44□□□□□ -0.42
SMPD4-215ENST00000457039 TXNIPQ9H3M7 391 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 TAS2R16Q9NYV7 291 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 AP4S1Q9Y587 144 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF726A6NNF4 738 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 CENPBD1B2RD01 187 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 GNGT2O14610 69 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 HNRNPRO43390 633 aaKnown RBP12.43□□□□□ -0.42
SMPD4-215ENST00000457039 DEAF1O75398 565 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-215ENST00000457039 NDUFB2O95178 105 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 CD14P08571 375 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 PGA4P0DJD7 388 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 PGA3P0DJD8 388 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 KIR2DL3P43628 341 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 DAP3P51398 398 aaKnown RBP12.43□□□□□ -0.42
SMPD4-215ENST00000457039 CTXN1P60606 82 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 SMARCD3Q6STE5 483 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 BHLHA15Q7RTS1 189 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-215ENST00000457039 FAM122BQ7Z309 247 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 AQP11Q8NBQ7 271 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 STEAP2Q8NFT2 490 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF519Q8TB69 540 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 GIPC3Q8TF64 312 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 S100PBPQ96BU1 408 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 BOD1Q96IK1 185 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 DACH2Q96NX9 599 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 MUS81Q96NY9 551 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 WFIKKN1Q96NZ8 548 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 KATNB1Q9BVA0 655 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 SLC24A3Q9HC58 644 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 NRIP3Q9NQ35 241 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 KCNN3Q9UGI6 736 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF346Q9UL40 294 aaKnown RBP12.43□□□□□ -0.42
SMPD4-215ENST00000457039 MGAT4BQ9UQ53 548 aa12.43□□□□□ -0.42
SMPD4-215ENST00000457039 CELSR2Q9HCU4 2923 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 SH3D21A4FU49 640 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 H3BNX3 289 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 TRMUO75648 421 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 THBDP07204 575 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 EPXP11678 715 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 FCGR1AP12314 374 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ACADSP16219 412 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 PPP3CBP16298 524 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 IL32P24001 234 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 FASP25445 335 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 CSNK1A1P48729 337 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 RPL27P61353 136 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 GABRA6Q16445 453 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 RFX4Q33E94 735 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ANKRD34AQ69YU3 496 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 HMBOX1Q6NT76 420 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF620Q6ZNG0 422 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 HDDC2Q7Z4H3 204 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ABHD12BQ7Z5M8 362 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 HS3ST5Q8IZT8 346 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 GPR137CQ8N3F9 429 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 C1orf162Q8NEQ5 155 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 PYDC1Q8WXC3 89 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 HDAC2Q92769 488 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF566Q969W8 418 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 NMD3Q96D46 503 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 FEVQ99581 238 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 NIPSNAP1Q9BPW8 284 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 POLDIP3Q9BY77 421 aaKnown RBP12.42□□□□□ -0.42
SMPD4-215ENST00000457039 OR52D1Q9H346 318 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 PDP1Q9P0J1 537 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms