RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 DNAJB6O75190 326 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF432O94892 652 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 UBBP0CG47 229 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 UBCP0CG48 685 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 S100A10P60903 97 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 BAMBIQ13145 260 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 MLF2Q15773 248 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 RNASE10Q5GAN6 216 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 MRGPREQ86SM8 312 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 PRSS58Q8IYP2 241 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ACBD4Q8NC06 268 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 CAMKVQ8NCB2 501 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 STOML3Q8TAV4 291 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 HAVCR1Q96D42 359 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 OR5H14A6NHG9 310 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 TUBAL3A6NHL2 446 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SNRPGP15A8MWD9 76 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 FGF17O60258 216 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 F12P00748 615 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 GLAP06280 429 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 RBM34P42696 430 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 EMDP50402 254 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 RPS27AP62979 156 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 UBA52P62987 128 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 FLI1Q01543 452 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 H3F3CQ6NXT2 135 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 PIPOXQ9P0Z9 390 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ATXN7L1Q9ULK2 861 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SGCEO43556 437 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SLC25A12O75746 678 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 GPANK1O95872 356 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 IL9P15248 144 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 PRMT2P55345 433 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 OR5M9Q8NGP3 310 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 OR2L8Q8NGY9 312 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 OR10AC1Q8NH08 325 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 KISS1RQ969F8 398 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF649Q9BS31 505 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 APMAPQ9HDC9 416 aa12.69□□□□□ -0.38
UBE2D3-210ENST00000453744 A0A1B0GV50 99 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 DIO1P49895 249 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 CAPZA1P52907 286 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 IL13RA1P78552 427 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 RUNX2Q13950 521 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 GFOD2Q3B7J2 385 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ALG10Q5BKT4 473 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 SVBPQ8N300 66 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 OR52H1Q8NGJ2 320 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 SHARPINQ9H0F6 387 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 Q9N2J8 555 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 POLR1DQ9Y2S0 133 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 LAMA3Q16787 3333 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 RDH16O75452 317 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 WDPCPO95876 746 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 CEBPGP53567 150 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ACTBP60709 375 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ACTG1P63261 375 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 RBM39Q14498 530 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF660Q6AZW8 331 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 C3orf33Q6P1S2 294 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 FAM199XQ6PEV8 388 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 FIGLAQ6QHK4 219 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 NUDT18Q6ZVK8 323 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 RASGRP3Q8IV61 690 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 DND1Q8IYX4 353 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 TMIEQ8NEW7 156 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ZC3H10Q96K80 434 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 LINC00615Q96LM1 132 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 TINAGL1Q9GZM7 467 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 DHDHQ9UQ10 334 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 PIN1P1O15428 100 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 KCNJ13O60928 360 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ITGB8P26012 769 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 GPR143P51810 404 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 NANOS3P60323 173 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ILF3Q12906 894 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ULK3Q6PHR2 472 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 PRSS41Q7RTY9 318 aa12.68□□□□□ -0.38
UBE2D3-210ENST00000453744 ZNF550Q7Z398 422 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms