RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ZNF726A6NNF4 738 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 CLOCKO15516 846 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 KLF4O43474 513 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 RNF13O43567 381 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 TRAF3IP2O43734 574 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 PIP5K1CO60331 668 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ENTPD5O75356 428 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 SLC43A1O75387 559 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ADAP00813 363 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 IGHMP01871 453 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 APEHP13798 732 aaKnown RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 AHCYP23526 432 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 PAX7P23759 505 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 CD79BP40259 229 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 GSSP48637 474 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 SH3BGRP55822 239 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 POU3F1Q03052 451 aaPredicted RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 RPL18Q07020 188 aaKnown RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 COX10Q12887 443 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 TSPAN31Q12999 210 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 SEC23BQ15437 767 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ATP6AP1Q15904 470 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 MICAQ29983 383 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ZBED5Q49AG3 693 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ALG10Q5BKT4 473 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 FBXW9Q5XUX1 488 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 VWA1Q6PCB0 445 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 PLXDC2Q6UX71 529 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 CASP12Q6UXS9 341 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 CD300LDQ6UXZ3 194 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 TFAP2EQ6VUC0 442 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 Q6ZT83 130 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 CLDN22Q8N7P3 220 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 ZIC4Q8N9L1 334 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 OR6X1Q8NH79 312 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 UBASH3BQ8TF42 649 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 STMN2Q93045 179 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 SLCO4A1Q96BD0 722 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 DNAJA3Q96EY1 480 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 RBM24Q9BX46 236 aaKnown RBP7.71□□□□□ -1.18
COL28A1-205ENST00000453441 DGCR6LQ9BY27 220 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 SLCO5A1Q9H2Y9 848 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 B3GAT2Q9NPZ5 323 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 TAS2R5Q9NYW4 299 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 MALT1Q9UDY8 824 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 GPR52Q9Y2T5 361 aa7.71□□□□□ -1.18
COL28A1-205ENST00000453441 HCFC1P51610 2035 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 UNC119BA6NIH7 251 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 A6NIZ1 184 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 PRSS44E7EML9 344 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 LRRN3E7EW58 273 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 BLOC1S5-TXNDC5H3BN57 136 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 AHCYL1O43865 530 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 MGRN1O60291 552 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 RAMP1O60894 148 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF432O94892 652 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 NDUFB2O95178 105 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 GOSR1O95249 250 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 BCL10O95999 233 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 CD14P08571 375 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ANXA8P13928 327 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 POU2F1P14859 743 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 KLK2P20151 261 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 PSMB1P20618 241 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 COX5AP20674 150 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 MAKP20794 623 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 CBLP22681 906 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 GPR4P46093 362 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 CLDN17P56750 224 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 RAP1BP61224 184 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 RAP1AP62834 184 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 TGFBR3Q03167 851 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 TFF3Q07654 80 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ITGADQ13349 1161 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 KPNB1Q14974 876 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 GPR139Q6DWJ6 353 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 OR7E24Q6IFN5 339 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF770Q6IQ21 691 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 PGBD2Q6P3X8 592 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SHQ1Q6PI26 577 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 TBPL2Q6SJ96 375 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SMARCD3Q6STE5 483 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SLC35D2Q76EJ3 337 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 NUFIP2Q7Z417 695 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 LUZP2Q86TE4 346 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 P2RY8Q86VZ1 359 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 HIPK1Q86Z02 1210 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 GABRG1Q8N1C3 465 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 SVOPLQ8N434 492 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 LRRC17Q8N6Y2 441 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF610Q8N9Z0 462 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 C1orf162Q8NEQ5 155 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 STEAP2Q8NFT2 490 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 OR10G2Q8NGC3 310 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 GIPC3Q8TF64 312 aa7.7□□□□□ -1.18
COL28A1-205ENST00000453441 CENPNQ96H22 339 aaPredicted RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 FAM46AQ96IP4 442 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 ZNF385AQ96PM9 386 aaKnown RBP7.7□□□□□ -1.18
COL28A1-205ENST00000453441 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms