RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 E7EQL1 145 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 C11orf98E9PRG8 122 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 ABCD4O14678 606 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 CLOCKO15516 846 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 PIP5K1CO60331 668 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 CDH2P19022 906 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 MAKP20794 623 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 AHCYP23526 432 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 MSX2P35548 267 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 ZNF133P52736 654 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 RPS4XP62701 263 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 PRKCDQ05655 676 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 RUNX1T1Q06455 604 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 RPL18Q07020 188 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 SPOCK1Q08629 439 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 LAPTM4AQ15012 233 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 CEACAM16Q2WEN9 425 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 HMBOX1Q6NT76 420 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 PRSS57Q6UWY2 283 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 B3GLCTQ6Y288 498 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 WFDC11Q8NEX6 87 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 MOSPD2Q8NHP6 518 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 SMAP2Q8WU79 429 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 ADAD1Q96M93 576 aaKnown RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 NMNAT1Q9HAN9 279 aaPredicted RBP14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 RHCGQ9UBD6 479 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 MED31Q9Y3C7 131 aa14.05□□□□□ -0.16
SCAMP4-205ENST00000452128 IGHV1-18A0A0C4DH31 117 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 A0A1W2PRQ8 180 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 NPIPB13A6NJU9 1138 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ZNF99A8MXY4 864 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 NPIPB4C9JG80 1138 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 M0R3G1 203 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 AKAP8O43823 692 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 KRT33AO76009 404 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 IGKV3-15P01624 115 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ZNF26P17031 533 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 PAX7P23759 505 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 AQP2P41181 271 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 BIDP55957 195 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 VLDLRP98155 873 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 CAMK2DQ13557 499 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 DGCR6Q14129 220 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 TRAM2Q15035 370 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 SAMD4BQ5PRF9 694 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ARMC4Q5T2S8 1044 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 GKAP1Q5VSY0 366 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 TBPL2Q6SJ96 375 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 KLHL17Q6TDP4 642 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 RNF113BQ8IZP6 322 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 GPR137CQ8N3F9 429 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 SLC7A13Q8TCU3 470 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ACOT11Q8WXI4 607 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 SLC25A44Q96H78 314 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 NSL1Q96IY1 281 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 CCL19Q99731 98 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ANKRD19PQ9H560 264 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 CISD1Q9NZ45 108 aaKnown RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 ZNF224Q9NZL3 707 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 RPS6KA6Q9UK32 745 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 HIF3AQ9Y2N7 669 aa14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 MAGED1Q9Y5V3 778 aaPredicted RBP14.04□□□□□ -0.16
SCAMP4-205ENST00000452128 A0A096LPE4 126 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 A0A1W2PPZ6 126 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 BLOC1S5-TXNDC5H3BN57 136 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 WNT11O96014 354 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 HIST1H2ABP04908 130 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 PGA4P0DJD7 388 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 PGA3P0DJD8 388 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 CBR1P16152 277 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 NKX6-1P78426 367 aaPredicted RBP14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 FOXD4Q12950 439 aaPredicted RBP14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 CARD17Q5XLA6 110 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 C11orf71Q6IPW1 123 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 TMPRSS11FQ6ZWK6 438 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 FKBP9P1Q75LS8 142 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 HIST3H2AQ7L7L0 130 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 NRMQ8IXM6 262 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 DEFB107AQ8IZN7 70 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 HIST1H2ACQ93077 130 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 FBXW5Q969U6 566 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 FAM162AQ96A26 154 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 BPIFA2Q96DR5 249 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 TRAF4Q9BUZ4 470 aaPredicted RBP14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 FNDC11Q9BVV2 318 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 GLTPQ9NZD2 209 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
SCAMP4-205ENST00000452128 ZNF726A6NNF4 738 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 B2RBV5 119 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 CENPBD1B2RD01 187 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 M0R1B8 84 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 RNF13O43567 381 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 SMPD2O60906 423 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 PTP4A3O75365 173 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 OR6A2O95222 327 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 F13BP05160 661 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 RHCEP18577 417 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 PTH2RP49190 550 aa14.02□□□□□ -0.17
SCAMP4-205ENST00000452128 MNAT1P51948 309 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms