RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ITGB2P05107 769 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
ITGB4-202ENST00000449880 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 ABHD12BQ7Z5M8 362 aaPredicted RBP12.88□□□□□ -0.35
ITGB4-202ENST00000449880 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 UPRTQ96BW1 309 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 DUSP23Q9BVJ7 150 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 RHBDD3Q9Y3P4 386 aa12.88□□□□□ -0.35
ITGB4-202ENST00000449880 HSPB2A8KAH6 182 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 IL5P05113 134 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ETV5P41161 510 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HBG1P69891 147 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HBG2P69892 147 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 MSMO1Q15800 293 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HSPB2Q16082 182 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 SLC41A2Q96JW4 573 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 KATNB1Q9BVA0 655 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 FGF20Q9NP95 211 aaPredicted RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ACER3Q9NUN7 267 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 POMT2Q9UKY4 750 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ACOD1A6NK06 481 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 KLK8O60259 260 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 OR2C1O95371 312 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ARSAP15289 507 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 GCH1P30793 250 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 CXCL12P48061 93 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 TPBGQ13641 420 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 MEX3BQ6ZN04 569 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 TEX37Q96LM6 180 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 CEBPBP17676 345 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 SRP9P49458 86 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 NR0B2Q15466 257 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HNRNPA1L2Q32P51 320 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 LYSMD4Q5XG99 296 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 FBXW12Q6X9E4 464 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 Q6ZSR6 202 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 RBM24Q9BX46 236 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 MCTS1Q9ULC4 181 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 FAM171A2A8MVW0 826 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF587BE7ETH6 402 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HLA-FP30511 346 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 OTUD1Q5VV17 481 aaPredicted RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 XAF1Q6GPH4 301 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 OR2L13Q8N349 312 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF480Q8WV37 535 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 C22orf15Q8WYQ4 148 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 TSSK2Q96PF2 358 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 UHRF2Q96PU4 802 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 HINT2Q9BX68 163 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 ZNF160Q9HCG1 818 aa12.87□□□□□ -0.35
ITGB4-202ENST00000449880 SIDT1Q9NXL6 827 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 COL11A2P13942 1736 aaPredicted RBP12.87□□□□□ -0.35
ITGB4-202ENST00000449880 AKR7A2O43488 359 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ANXA7P20073 488 aaKnown RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 GALP22466 123 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 EFNA3P52797 238 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ERVK-16P61578 105 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 SLC22A24Q8N4F4 322 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 NAT6Q93015 286 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 BCL2L11O43521 198 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 GYPBP06028 91 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 HOXA9P31269 272 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 APLNRP35414 380 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ACVR1Q04771 509 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TECPR1Q7Z6L1 1165 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 DPPA2Q7Z7J5 298 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 CLEC1AQ8NC01 280 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 FAM3DQ96BQ1 224 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 ACOXLQ9NUZ1 547 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 PURGQ9UJV8 347 aaKnown RBP12.86□□□□□ -0.35
ITGB4-202ENST00000449880 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TGFBR3Q03167 851 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 MZT1Q08AG7 82 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 HSD11B1LQ7Z5J1 315 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 OR5AR1Q8NGP9 310 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TXN2Q99757 166 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 SPHK1Q9NYA1 384 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TAS2R5Q9NYW4 299 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
ITGB4-202ENST00000449880 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms