RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CDK2AP1O14519 115 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 MT-ND4P03905 459 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 MAS1P04201 325 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 PSMD4P55036 377 aaKnown RBP13.4□□□□□ -0.26
SF1-211ENST00000448404 ACTC1P68032 377 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 ACTA1P68133 377 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 ELAVL1Q15717 326 aaKnown RBP13.4□□□□□ -0.26
SF1-211ENST00000448404 SLC6A19Q695T7 634 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 FAM199XQ6PEV8 388 aaPredicted RBP13.4□□□□□ -0.26
SF1-211ENST00000448404 COX15Q7KZN9 410 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 PLXDC1Q8IUK5 500 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 CADM4Q8NFZ8 388 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 PMM1Q92871 262 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 HLA-CQ95604 372 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 RNF170Q96K19 258 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 FRRS1LQ9P0K9 344 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 HIF3AQ9Y2N7 669 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 K7ESF4 209 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 OGG1O15527 345 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 FLRT2O43155 660 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 GLCEO94923 617 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 YES1P07947 543 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 PITPNBP48739 271 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 ARSKQ6UWY0 536 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 D2HGDHQ8N465 521 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 ANGPTL6Q8NI99 470 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 DHRS9Q9BPW9 319 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 NKIRAS2Q9NYR9 191 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 MED11Q9P086 117 aa13.4□□□□□ -0.26
SF1-211ENST00000448404 A0A1W2PQM1 296 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 OR6C70A6NIJ9 312 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 NUDT21O43809 227 aaKnown RBP13.39□□□□□ -0.27
SF1-211ENST00000448404 PPM1BO75688 479 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 PRKAR1AP10644 381 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 GLB1P16278 677 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 UQCRC1P31930 480 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 TALDO1P37837 337 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 FMODQ06828 376 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 HSD17B12Q53GQ0 312 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 PWWP2BQ6NUJ5 590 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 CMIPQ8IY22 773 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 KCNJ15Q99712 375 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 INPP5EQ9NRR6 644 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 TRAV8-7A0A075B6U6 113 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 A0A1B0GX78 115 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 H3BML4 177 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 ARPC3O15145 178 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 SDHAP31040 664 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 BTCP35070 178 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 PRPS1P60891 318 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 FCRLAQ7L513 359 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 LRRC28Q86X40 367 aaPredicted RBP13.39□□□□□ -0.27
SF1-211ENST00000448404 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 SLCO1C1Q9NYB5 712 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 MYEF2Q9P2K5 600 aaKnown RBP13.39□□□□□ -0.27
SF1-211ENST00000448404 KLHL21Q9UJP4 597 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 SLC22A13Q9Y226 551 aa13.39□□□□□ -0.27
SF1-211ENST00000448404 TEX51A0A1B0GUA7 166 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SUSD5O60279 629 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 TSPAN2O60636 221 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SRMP19623 302 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 CXCL12P48061 93 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 LGALS3BPQ08380 585 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 ACKR1Q16570 336 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 TMEM255AQ5JRV8 349 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SIAH3Q8IW03 269 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 TIGD4Q8IY51 512 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 EXD3Q8N9H8 876 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 OR1N1Q8NGS0 311 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 PTDSS2Q9BVG9 487 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 UCK1Q9HA47 277 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 COQ3Q9NZJ6 369 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 HMX3A6NHT5 357 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SEC14L5O43304 696 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 AKR7A2O43488 359 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 UPK3AO75631 287 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 HIST1H2ABP04908 130 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 ADRA2CP18825 462 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 NPR2P20594 1047 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 GIFP27352 417 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 HIST3H2AQ7L7L0 130 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 ADGRG3Q86Y34 549 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 POMGNT2Q8NAT1 580 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 ZNF417Q8TAU3 575 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 HIST1H2ACQ93077 130 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SLC41A2Q96JW4 573 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 ZNF587Q96SQ5 575 aaPredicted RBP13.38□□□□□ -0.27
SF1-211ENST00000448404 LAMP5Q9UJQ1 280 aa13.38□□□□□ -0.27
SF1-211ENST00000448404 SLC16A7O60669 478 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 ALOX12BO75342 701 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SLC43A1O75387 559 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 SCO1O75880 301 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 CELA2AP08217 269 aa13.37□□□□□ -0.27
SF1-211ENST00000448404 PNMTP11086 282 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms