RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR13C5Q8NGS8 318 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 OR56A3Q8NH54 315 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 SUN3Q8TAQ9 357 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 CYB5D2Q8WUJ1 264 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 IRF7Q92985 503 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 SMIM8Q96KF7 97 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 RHOVQ96L33 236 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 C1QTNF2Q9BXJ5 285 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 PRM3Q9NNZ6 103 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 WNT6Q9Y6F9 365 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3DA0A087WVF3 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3IA0A087WXS9 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3EA0A087X179 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3KA0A087X1G2 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3FA6NER0 549 aaPredicted RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3LB9A6J9 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 MTX2O75431 263 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 HKR1P10072 659 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 NR2F1P10589 423 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 PYCR1P32322 319 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 MANFP55145 182 aaKnown RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 OR12D2P58182 307 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 RPS11P62280 158 aaKnown RBP eCLIP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ACTA2P62736 377 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ACTG2P63267 376 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TAF13Q15543 124 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3CQ6IPX1 549 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 RPL22L1Q6P5R6 122 aaKnown RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 SYT9Q86SS6 491 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TBC1D3Q8IZP1 549 aaPredicted RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF764Q96H86 408 aaPredicted RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 LRRC3BQ96PB8 259 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 OR5B2Q96R09 309 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 EFCAB11Q9BUY7 163 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ANKRD10Q9NXR5 420 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 WIF1Q9Y5W5 379 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 V9GY05 133 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 EYSQ5T1H1 3165 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 GRM6O15303 877 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 MBTPS2O43462 519 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 FGF19O95750 216 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 FGBP02675 491 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 GBAP04062 536 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 FRKP42685 505 aaPredicted RBP17.55■□□□□ 0.4
HMGA1-205ENST00000447654 DHCR24Q15392 516 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 SSX6Q7RTT6 188 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 NUDT13Q86X67 352 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 VRK3Q8IV63 474 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 GPBAR1Q8TDU6 330 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 LCN9Q8WX39 176 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 PMM1Q92871 262 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 SCAMP4Q969E2 229 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 S100PBPQ96BU1 408 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ASB16Q96NS5 453 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ARHGDIGQ99819 225 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 METTL9Q9H1A3 318 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 TMEM231Q9H6L2 316 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 OR5V1Q9UGF6 321 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 ASF1AQ9Y294 204 aa17.55■□□□□ 0.4
HMGA1-205ENST00000447654 MKRN2OSH3BPM6 223 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 XRCC3O43542 346 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 SYPL1Q16563 259 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 SERPINA13PQ6UXR4 307 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 OR56B1Q8NGI3 324 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 ING5Q8WYH8 240 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 BADQ92934 168 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 RAB24Q969Q5 203 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 MARS2Q96GW9 593 aaKnown RBP17.54■□□□□ 0.4
HMGA1-205ENST00000447654 LRIG1Q96JA1 1093 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 S100A13Q99584 98 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 RPS10P5Q9NQ39 176 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 MEPEQ9NQ76 525 aaPredicted RBP17.54■□□□□ 0.4
HMGA1-205ENST00000447654 SPHK2Q9NRA0 654 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF230Q9UIE0 474 aaPredicted RBP17.54■□□□□ 0.4
HMGA1-205ENST00000447654 SLC35A3Q9Y2D2 325 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
HMGA1-205ENST00000447654 A0A087X0M5 115 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 A0A1B0GX30 115 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 FAM183AA6NL82 134 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 FBXO24O75426 580 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 EIF5AP63241 154 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MESP2Q0VG99 397 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 AWAT2Q6E213 333 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MRM1Q6IN84 353 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 LRRTM1Q86UE6 522 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MEX3DQ86XN8 651 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 SPPL3Q8TCT6 385 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 PPP1R1CQ8WVI7 109 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 NECAB3Q96P71 396 aaPredicted RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 GFI1Q99684 422 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MRPL37Q9BZE1 423 aaKnown RBP17.53■□□□□ 0.4
HMGA1-205ENST00000447654 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 POFUT1Q9H488 388 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 IL21RQ9HBE5 538 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 ADGRL4Q9HBW9 690 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 PIAS3Q9Y6X2 628 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 PRAMEF27A3QJZ7 478 aa17.53■□□□□ 0.4
HMGA1-205ENST00000447654 MAGEB4O15481 346 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms