RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZNF676	Q8N7Q3	588 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	PLPP7	Q8NBV4	271 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	OR4C3	Q8NH37	302 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	FCAMR	Q8WWV6	532 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	OR1E3	Q8WZA6	343 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	NSMAF	Q92636	917 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	CNN2	Q99439	309 aa	Known RBP	11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	DPYSL5	Q9BPU6	564 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	LMAN2L	Q9H0V9	348 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	C14orf105	Q9NVL8	296 aa		11.47	□□□□□ -0.57
DDR1-238	ENST00000446312	TRAV8-7	A0A075B6U6	113 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	MEIKIN	A0A087WXM9	373 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	DUXA	A6NLW8	204 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312		H0YGG7	62 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	GTF2F2	P13984	249 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	S100P	P25815	95 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	NRG3	P56975	720 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	ARF3	P61204	181 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	BTG2	P78543	158 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	REL	Q04864	619 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	CDK5R1	Q15078	307 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	FAM69A	Q5T7M9	428 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	FCRL6	Q6DN72	434 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	ZNF619	Q8N2I2	560 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	OR51S1	Q8NGJ8	323 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	HAVCR2	Q8TDQ0	301 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	FAM3C	Q92520	227 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	SLC25A38	Q96DW6	304 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	COX14	Q96I36	57 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	CALML5	Q9NZT1	146 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	ST6GALNAC2	Q9UJ37	374 aa		11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-238	ENST00000446312	FREM2	Q5SZK8	3169 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312		G3V3Q6	166 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	KLF4	O43474	513 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	PLPP2	O43688	288 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	IGKV1D-16	P01601	117 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	OPN1LW	P04000	364 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	ANXA2	P07355	339 aa	Known RBP	11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	IGFALS	P35858	605 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	NUBP1	P53384	320 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	KLF9	Q13886	244 aa	Predicted RBP	11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	CBFB	Q13951	182 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	RAB11FIP2	Q7L804	512 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	LINC00615	Q96LM1	132 aa	Predicted RBP	11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	SLC17A9	Q9BYT1	436 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	OR5V1	Q9UGF6	321 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	SCP2D1	Q9UJQ7	156 aa		11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	CDV3	Q9UKY7	258 aa	Known RBP	11.46	□□□□□ -0.58
DDR1-238	ENST00000446312	C7orf66	A4D0T2	115 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	C2orf74	A8MZ97	194 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SYT5	O00445	386 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	EIF1AY	O14602	144 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	GNRH1	P01148	92 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ATP1B1	P05026	303 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	KLK3	P07288	261 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SULT1A3	P0DMM9	295 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SULT1A4	P0DMN0	295 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	VSIG10L2	P0DP72	767 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	HPGD	P15428	266 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	LSS	P48449	732 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	TDG	Q13569	410 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ELOA3B	Q3SY89	546 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	RNLS	Q5VYX0	342 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	DMKN	Q6E0U4	476 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	RBMS3	Q6XE24	437 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ELOA3	Q8NG57	546 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	CASTOR1	Q8WTX7	329 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	TSEN15	Q8WW01	171 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	FAM46B	Q96A09	425 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	PLA2G2F	Q9BZM2	168 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	WDR76	Q9H967	626 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ZNF223	Q9UK11	482 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	SLC22A13	Q9Y226	551 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	FRY	Q5TBA9	3013 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	DCDC2B	A2VCK2	349 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	DNASE2	O00115	360 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	ACAA1	P09110	424 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	NID1	P14543	1247 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	GJA4	P35212	333 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	EIF1AX	P47813	144 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	POU3F4	P49335	361 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	P2RX1	P51575	399 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	DPT	Q07507	201 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	TMEM35A	Q53FP2	167 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	C1QL3	Q5VWW1	255 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	OR7E24	Q6IFN5	339 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	FIGLA	Q6QHK4	219 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	LRRN1	Q6UXK5	716 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	CD163	Q86VB7	1156 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	POLE3	Q9NRF9	147 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	GPR160	Q9UJ42	338 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	MFSD2B	A6NFX1	497 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	IFNG	P01579	166 aa		11.45	□□□□□ -0.58
DDR1-238	ENST00000446312	MAOA	P21397	527 aa		11.45	□□□□□ -0.58

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