RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 AGAP6Q5VW22 663 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 CBLL1Q75N03 491 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 FBXL14Q8N1E6 418 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 KCTD14Q9BQ13 255 aaPredicted RBP12.86□□□□□ -0.35
USE1-202ENST00000445667 SEC61A2Q9H9S3 476 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 FAIMQ9NVQ4 179 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 RHCGQ9UBD6 479 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 GDF2Q9UK05 429 aaPredicted RBP12.86□□□□□ -0.35
USE1-202ENST00000445667 A4GNTQ9UNA3 340 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 ARID1AO14497 2285 aa12.86□□□□□ -0.35
USE1-202ENST00000445667 USF3Q68DE3 2245 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 SMAD7O15105 426 aaKnown RBP12.85□□□□□ -0.35
USE1-202ENST00000445667 PIP5K1CO60331 668 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 OR7A10O76100 309 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 SERPINA1P01009 418 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
USE1-202ENST00000445667 PRDX6P30041 224 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 CAPZA2P47755 286 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
USE1-202ENST00000445667 ST3GAL3Q11203 375 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 MUC15Q8N387 334 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 SGTBQ96EQ0 304 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 HS6ST2Q96MM7 605 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 BDH2Q9BUT1 245 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 ULBP2Q9BZM5 246 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 CRNNQ9UBG3 495 aaPredicted RBP12.85□□□□□ -0.35
USE1-202ENST00000445667 ABCD2Q9UBJ2 740 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 POFUT2Q9Y2G5 429 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 MED31Q9Y3C7 131 aa12.85□□□□□ -0.35
USE1-202ENST00000445667 IGHV4-39P01824 125 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 IFNW1P05000 195 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 F13BP05160 661 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CELA3BP08861 270 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CECR9P0C854 216 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 THRBP10828 461 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CBR1P16152 277 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CALCRP30988 508 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 AQP2P41181 271 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 RPL18Q07020 188 aaKnown RBP12.84□□□□□ -0.35
USE1-202ENST00000445667 LAPTM4AQ15012 233 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 IFI44LQ53G44 452 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 ZNF813Q6ZN06 617 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 Q71RC1 249 aaPredicted RBP12.84□□□□□ -0.35
USE1-202ENST00000445667 FKBP9P1Q75LS8 142 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 MDP1Q86V88 176 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 MYPOPQ86VE0 399 aaPredicted RBP12.84□□□□□ -0.35
USE1-202ENST00000445667 RNF148Q8N7C7 305 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 FAM162AQ96A26 154 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 HSH2DQ96JZ2 352 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 PRRC1Q96M27 445 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 ADAD1Q96M93 576 aaKnown RBP12.84□□□□□ -0.35
USE1-202ENST00000445667 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CACNG6Q9BXT2 260 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 GRIP2Q9C0E4 1043 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 CBLN4Q9NTU7 201 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 EGFL7Q9UHF1 273 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 ACANP16112 2415 aa12.84□□□□□ -0.35
USE1-202ENST00000445667 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 NDUFAB1O14561 156 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 FFAR1O14842 300 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 BCL10O95999 233 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 IGKV3-15P01624 115 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 IGLV1-44P01699 117 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 HLA-HP01893 362 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 CRYAAP02489 173 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 CD79AP11912 226 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 PAX7P23759 505 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 APOBEC3AP31941 199 aaPredicted RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 ACVR1BP36896 505 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 NAAAQ02083 359 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 RUNX1T1Q06455 604 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 PIGFQ07326 219 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 NPRL3Q12980 569 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 TNK1Q13470 666 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 CLEC12BQ2HXU8 276 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 ZNF544Q6NX49 715 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 LRFN4Q6PJG9 635 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 MOSPD2Q8NHP6 518 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 GEMIN6Q8WXD5 167 aaKnown RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 HTRA1Q92743 480 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 ZNF566Q969W8 418 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 SLC25A44Q96H78 314 aaPredicted RBP12.83□□□□□ -0.36
USE1-202ENST00000445667 COX4I2Q96KJ9 171 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 FOXB1Q99853 325 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 FNDC11Q9BVV2 318 aa12.83□□□□□ -0.36
USE1-202ENST00000445667 ARL8BQ9NVJ2 186 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms