RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 PRRG3Q9BZD7 231 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 MED29Q9NX70 200 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 REV1Q9UBZ9 1251 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 IL20RAQ9UHF4 553 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
TIMP1-204ENST00000445623 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 CENPBD1B2RD01 187 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ARPC3O15145 178 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 TNFSF13O75888 250 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 SMNDC1O75940 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 PPP1R3DO95685 299 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 CD8BP10966 210 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ZNF26P17031 533 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 BMP5P22003 454 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ACVR1BP36896 505 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 CRISP1P54107 249 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ERVK-25P63136 954 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 MELKQ14680 651 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ANKRD34AQ69YU3 496 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 NCCRP1Q6ZVX7 275 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 NUFIP2Q7Z417 695 aaKnown RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 JAZF1Q86VZ6 243 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 CCDC71Q8IV32 467 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 FNDC8Q8TC99 324 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ZNF566Q969W8 418 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 STARD4Q96DR4 205 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 SLC25A44Q96H78 314 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ERMAPQ96PL5 475 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 TSPAN32Q96QS1 320 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 GABARAPL3Q9BY60 117 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 PLA2G12AQ9BZM1 189 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 RIBC2Q9H4K1 309 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 B3GAT2Q9NPZ5 323 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 PLSCR4Q9NRQ2 329 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 TMEFF2Q9UIK5 374 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 ZNF346Q9UL40 294 aaKnown RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 IER3IP1Q9Y5U9 82 aa11.68□□□□□ -0.54
TIMP1-204ENST00000445623 INTS1Q8N201 2190 aaKnown RBP11.68□□□□□ -0.54
TIMP1-204ENST00000445623 TEX13CA0A0J9YWL9 993 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 EEF1E1-BLOC1S5C9J1V9 151 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 MSTNO14793 375 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 EEF1E1O43324 174 aaKnown RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 MITFO75030 526 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 KRT33AO76009 404 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ZNF432O94892 652 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 CNOT4O95628 575 aaKnown RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 TXNDC12O95881 172 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 IFNGP01579 166 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 HMGN1P05114 100 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ACADSP16219 412 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 AGAP20933 346 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 GRK5P34947 590 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 OR3A2P47893 321 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 CSNK1A1P48729 337 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SELENOPP49908 381 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 CLRN1P58418 232 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 NPRL3Q12980 569 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ITGADQ13349 1161 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 CAMK2DQ13557 499 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 KRR1Q13601 381 aaKnown RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SLC25A35Q3KQZ1 300 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ARMC4Q5T2S8 1044 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 XKRXQ6PP77 449 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 TFAP2EQ6VUC0 442 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 NHLRC1Q6VVB1 395 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 FAM122BQ7Z309 247 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 BTLAQ7Z6A9 289 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 UBE2J2Q8N2K1 259 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 GPR137CQ8N3F9 429 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 LNX2Q8N448 690 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 GALNT4Q8N4A0 578 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ARIH2OSQ8N7S6 290 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 OR8D4Q8NGM9 314 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 OR6N1Q8NGY5 312 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 CA5BP1Q8WTZ4 195 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 TXNDC15Q96J42 360 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 LRR1Q96L50 414 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 OR2M2Q96R28 347 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SLC29A1Q99808 456 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ALG12Q9BV10 488 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 EMC6Q9BV81 110 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 RASSF4Q9H2L5 321 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SLCO5A1Q9H2Y9 848 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SLC25A19Q9HC21 320 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 SMPD3Q9NY59 655 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 UPB1Q9UBR1 384 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 KLHL21Q9UJP4 597 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 ADAM18Q9Y3Q7 739 aa11.67□□□□□ -0.54
TIMP1-204ENST00000445623 NCOA6Q14686 2063 aaPredicted RBP11.67□□□□□ -0.54
TIMP1-204ENST00000445623 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms