RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SLC2A10O95528 541 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 HMGN1P05114 100 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 GABRB1P18505 474 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 CEACAM8P31997 349 aaPredicted RBP13.41□□□□□ -0.26
CCNE1-203ENST00000444983 CDKN2AP42771 156 aaKnown RBP13.41□□□□□ -0.26
CCNE1-203ENST00000444983 ISL1P61371 349 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 IL18R1Q13478 541 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 C1DQ13901 141 aaKnown RBP13.41□□□□□ -0.26
CCNE1-203ENST00000444983 HIST3H3Q16695 136 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 SLC35F1Q5T1Q4 408 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 B3GNT6Q6ZMB0 384 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 PTCHD4Q6ZW05 846 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 MARVELD2Q8N4S9 558 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 CYGBQ8WWM9 190 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
CCNE1-203ENST00000444983 MUS81Q96NY9 551 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 EMC6Q9BV81 110 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 ANKRD60Q9BZ19 345 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 RCE1Q9Y256 329 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 GMPPBQ9Y5P6 360 aa13.41□□□□□ -0.26
CCNE1-203ENST00000444983 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 STSP08842 583 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 GLI4P10075 376 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 NOS3P29474 1203 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 AGTR1P30556 359 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ACVR1BP36896 505 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CA7P43166 264 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 BIDP55957 195 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CLDN17P56750 224 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 TLE1Q04724 770 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 MELKQ14680 651 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 EEF1A1P5Q5VTE0 462 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 FAM205BPQ63HN1 556 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 OR2A2Q6IF42 318 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 C3P1Q6ZMU1 363 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF775Q96BV0 537 aaPredicted RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 OR2M2Q96R28 347 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 SNX18Q96RF0 628 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 EMC3Q9P0I2 261 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 FREM1Q5H8C1 2179 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 PRKYO43930 277 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ACADSP16219 412 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 PCYT1AP49585 367 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 SELENOPP49908 381 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CDC42P60953 191 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 KRR1Q13601 381 aaKnown RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 SLC25A30Q5SVS4 291 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CASP12Q6UXS9 341 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 FAM214BQ7L5A3 538 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ADCK1Q86TW2 530 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ENTHD1Q8IYW4 607 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 NAXEQ8NCW5 288 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 FBLIM1Q8WUP2 373 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 HDAC2Q92769 488 aaKnown RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 NMD3Q96D46 503 aaKnown RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ZFP3Q96NJ6 502 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 DMRTA2Q96SC8 542 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 NMNAT3Q96T66 252 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 VSX1Q9NZR4 365 aaPredicted RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 FOXD3Q9UJU5 478 aaPredicted RBP13.4□□□□□ -0.26
CCNE1-203ENST00000444983 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 RNF6Q9Y252 685 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
CCNE1-203ENST00000444983 INTS1Q8N201 2190 aaKnown RBP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 OR6C68A6NDL8 312 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 A6NIZ1 184 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 E9PLN8 166 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 AHCYL1O43865 530 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 TRMUO75648 421 aaKnown RBP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 TNFSF13O75888 250 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 CRHP06850 196 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 MYF6P23409 242 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 EDNRAP25101 427 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 KIR2DL2P43627 348 aaPredicted RBP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 RAP1BP61224 184 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 SNRPGP62308 76 aaKnown RBP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 RAP1AP62834 184 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 FOXF2Q12947 444 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
CCNE1-203ENST00000444983 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 FAM26EQ8N5C1 309 aa13.39□□□□□ -0.27
CCNE1-203ENST00000444983 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms