RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ANKRD17O75179 2603 aaKnown RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 PPP1R3DO95685 299 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 TP53P04637 393 aaPredicted RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 TSPAN19P0C672 248 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 OSMP13725 252 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 AGTR1P30556 359 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 SLC6A6P31641 620 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 TIMP3P35625 211 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 ALDH3A2P51648 485 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 ZIK1Q3SY52 487 aaPredicted RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 CARD17Q5XLA6 110 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 CASP12Q6UXS9 341 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 CD300LDQ6UXZ3 194 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 NUFIP2Q7Z417 695 aaKnown RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 CCDC71Q8IV32 467 aaPredicted RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 IQCF1Q8N6M8 205 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 LRRC75AQ8NAA5 344 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 TEX47Q8TBZ9 253 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 DNAJC9Q8WXX5 260 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 RND1Q92730 232 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 TSSK6Q9BXA6 273 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 NOSIPQ9Y314 301 aaKnown RBP15.27■□□□□ 0.04
LIME1-202ENST00000444951 EMC9Q9Y3B6 208 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 IER3IP1Q9Y5U9 82 aa15.27■□□□□ 0.04
LIME1-202ENST00000444951 HCFC1P51610 2035 aa15.27■□□□□ 0.03
LIME1-202ENST00000444951 ARHGAP21Q5T5U3 1957 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 IGKV3D-15A0A087WSY6 115 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 A0A0G2JNJ9 132 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 GPR171O14626 319 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 TRAF3IP2O43734 574 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 SS18L1O75177 396 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 BCL10O95999 233 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ALPLP05186 524 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 CEACAM8P31997 349 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 SLC16A1P53985 500 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 BIDP55957 195 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 PDK3Q15120 406 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 POU4F3Q15319 338 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ACKR1Q16570 336 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 RIPPLY2Q5TAB7 128 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 OGFRL1Q5TC84 451 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 NIPAL3Q6P499 406 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 AAED1Q7RTV5 226 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ZIC4Q8N9L1 334 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 NRG4Q8WWG1 115 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ERMAPQ96PL5 475 aaPredicted RBP15.26■□□□□ 0.03
LIME1-202ENST00000444951 BCO1Q9HAY6 547 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 GLRX2Q9NS18 164 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 USE1Q9NZ43 259 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 Q9UFV3 132 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ITGB1BP2Q9UKP3 347 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 ZFHX3Q15911 3703 aa15.26■□□□□ 0.03
LIME1-202ENST00000444951 LOC102725191A0A1B0GVB3 256 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 ZNF726A6NNF4 738 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 HSPB2A8KAH6 182 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 ZNF724A8MTY0 619 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 MRPL33O75394 65 aaKnown RBP15.25■□□□□ 0.03
LIME1-202ENST00000444951 SMNDC1O75940 238 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIME1-202ENST00000444951 CD14P08571 375 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 NOS3P29474 1203 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 CAMK2DQ13557 499 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 HSPB2Q16082 182 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 SLC35F1Q5T1Q4 408 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 TMEM236Q5W0B7 351 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 RPL13AP3Q6NVV1 102 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 VWA1Q6PCB0 445 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 DPY19L2P2Q6ZN68 376 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 FAM214BQ7L5A3 538 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 WDFY1Q8IWB7 410 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 ZNF100Q8IYN0 542 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 RASD2Q96D21 266 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 ZNF570Q96NI8 536 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 TSPAN32Q96QS1 320 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 SPOCK3Q9BQ16 436 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 IL20Q9NYY1 176 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 GRHPRQ9UBQ7 328 aa15.25■□□□□ 0.03
LIME1-202ENST00000444951 ZNF346Q9UL40 294 aaKnown RBP15.25■□□□□ 0.03
LIME1-202ENST00000444951 PHF3Q92576 2039 aaKnown RBP15.25■□□□□ 0.03
LIME1-202ENST00000444951 TEX13CA0A0J9YWL9 993 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 SLC35F4A4IF30 521 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 IGHV3-9P01782 118 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 CDH2P19022 906 aaPredicted RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 BMP5P22003 454 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 CTSSP25774 331 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 SSTR2P30874 369 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 NTF4P34130 210 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 ACVR1BP36896 505 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 POLR2IP36954 125 aaKnown RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 KIR2DL2P43627 348 aaPredicted RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 SELENOPP49908 381 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 DAP3P51398 398 aaKnown RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 RPS6KA3P51812 740 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 CRISP1P54107 249 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 RAD23AP54725 363 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 RPL27P61353 136 aaKnown RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 GINS1Q14691 196 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 MEX3BQ6ZN04 569 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms