RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 hCG_2039718K7EN88 272 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 TRAF3IP2O43734 574 aaPredicted RBP10.8□□□□□ -0.68
LTBR-204ENST00000444814 MGRN1O60291 552 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 RAD51DO75771 328 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 SERPINI2O75830 405 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 IGHG1P01857 330 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 THY1P04216 161 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 T-ENOLP0DO92 83 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 PTNP21246 168 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 SELENOPP49908 381 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 LTBQ06643 244 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 MS4A18Q3C1V0 323 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 ANKRD16Q6P6B7 361 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 TMEM108Q6UXF1 575 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 ZDHHC21Q8IVQ6 265 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 NRMQ8IXM6 262 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 KDM8Q8N371 416 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 OR8H1Q8NGG4 311 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 PFN4Q8NHR9 129 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 NANOS1Q8WY41 292 aaKnown RBP10.8□□□□□ -0.68
LTBR-204ENST00000444814 ZNF566Q969W8 418 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 CCDC124Q96CT7 223 aaKnown RBP10.8□□□□□ -0.68
LTBR-204ENST00000444814 MUS81Q96NY9 551 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 ULBP2Q9BZM5 246 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 MEPEQ9NQ76 525 aaPredicted RBP10.8□□□□□ -0.68
LTBR-204ENST00000444814 RHCGQ9UBD6 479 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 POFUT2Q9Y2G5 429 aa10.8□□□□□ -0.68
LTBR-204ENST00000444814 FAM221AA4D161 298 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 SLC35F4A4IF30 521 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 A6NIZ1 184 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 AQP12BA6NM10 295 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 RPL36A-HNRNPH2H7BZ11 118 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 TMCC2O75069 709 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 PDE5AO76074 875 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 CD3EP07766 207 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 IFNGR1P15260 489 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 BTF3P20290 206 aaKnown RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 DNASE1P24855 282 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 RRM2P31350 389 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 MSX2P35548 267 aaPredicted RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 GUCA1AP43080 201 aaPredicted RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 GTF2A1P52655 376 aaPredicted RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 BIDP55957 195 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 CLRN1P58418 232 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 RAP1BP61224 184 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 RAP1AP62834 184 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 ROR2Q01974 943 aaKnown RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 BNIP1Q12981 228 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 TAB1Q15750 504 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 ALG10Q5BKT4 473 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 CYP2R1Q6VVX0 501 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 PIWIL3Q7Z3Z3 882 aaKnown RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 AQP12AQ8IXF9 295 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 MAGEE2Q8TD90 523 aaPredicted RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 NINJ1Q92982 152 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 C7orf34Q96L11 122 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 OR2M2Q96R28 347 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 KCNS3Q9BQ31 491 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 FBXL3Q9UKT7 428 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 HIF3AQ9Y2N7 669 aa10.79□□□□□ -0.68
LTBR-204ENST00000444814 SPENQ96T58 3664 aaKnown RBP10.79□□□□□ -0.68
LTBR-204ENST00000444814 A0A087WUU8 490 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 LINC00854A0A1B0GVQ3 168 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 J3KTA2 159 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 ZNF432O94892 652 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
LTBR-204ENST00000444814 HRGP04196 525 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 PRF1P14222 555 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 PTAFRP25105 342 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 RPL4P36578 427 aaKnown RBP10.78□□□□□ -0.68
LTBR-204ENST00000444814 ZNF84P51523 738 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 RPL18Q07020 188 aaKnown RBP10.78□□□□□ -0.68
LTBR-204ENST00000444814 FLOT2Q14254 428 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 GABRA6Q16445 453 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 CCDC121Q6ZUS5 278 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 TMPRSS11FQ6ZWK6 438 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 DPPA2Q7Z7J5 298 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 CDC20BQ86Y33 519 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 C20orf196Q8IYI0 205 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 BOD1Q96IK1 185 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 RSRC1Q96IZ7 334 aaKnown RBP10.78□□□□□ -0.68
LTBR-204ENST00000444814 ALKBH3Q96Q83 286 aaPredicted RBP10.78□□□□□ -0.68
LTBR-204ENST00000444814 SEPHS2Q99611 448 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 SLC17A5Q9NRA2 495 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 TAS2R5Q9NYW4 299 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 SEC14L4Q9UDX3 406 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 RELNP78509 3460 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 HECTD1Q9ULT8 2610 aa10.78□□□□□ -0.68
LTBR-204ENST00000444814 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.77□□□□□ -0.68
LTBR-204ENST00000444814 ZNF99A8MXY4 864 aaPredicted RBP10.77□□□□□ -0.68
LTBR-204ENST00000444814 LRRN3E7EW58 273 aa10.77□□□□□ -0.68
LTBR-204ENST00000444814 M0R3G1 203 aa10.77□□□□□ -0.68
LTBR-204ENST00000444814 PDLIM1O00151 329 aa10.77□□□□□ -0.68
LTBR-204ENST00000444814 XKRYO14609 159 aa10.77□□□□□ -0.68
LTBR-204ENST00000444814 FFAR1O14842 300 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms