RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR10D4PQ8NGN7 298 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GTF3AQ92664 365 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 BPIFA2Q96DR5 249 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ADGRL4Q9HBW9 690 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 KDM4FA0A1W2PPD8 638 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ERI3O43414 337 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 TIMP2P16035 220 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 RAB6AP20340 208 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ARTNQ5T4W7 220 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 NSUN5P2Q63ZY6 315 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ADAM5Q6NVV9 412 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CLEC9AQ6UXN8 241 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HTR3DQ70Z44 454 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GPR142Q7Z601 462 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR2G2Q8NGZ5 317 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SUCNR1Q9BXA5 334 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 KIAA1217Q5T5P2 1943 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 A0A087WZY1 265 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CYTIPO60759 359 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ABCD3P28288 659 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 RTP2Q5QGT7 225 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SLC24A5Q71RS6 500 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 C2orf15Q8WU43 125 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 SPACA1Q9HBV2 294 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CMC2Q9NRP2 79 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 DOCK6Q96HP0 2047 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR2T1O43869 369 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GJB5O95377 273 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CD14P08571 375 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ELFN1P0C7U0 828 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GPR1P46091 355 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 LSSP48449 732 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CDK5R1Q15078 307 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ELAVL1Q15717 326 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 RNASE10Q5GAN6 216 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 CXCL17Q6UXB2 119 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MEGF10Q96KG7 1140 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TMEM100Q9NV29 134 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SEC14L6B5MCN3 397 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GYPBP06028 91 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ADH1AP07327 375 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MST1P26927 711 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CD163Q86VB7 1156 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SGPP1Q9BX95 441 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 KATNBL1Q9H079 304 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 UNKLQ9H9P5 680 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 ATXN7L1Q9ULK2 861 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 FER1L6Q2WGJ9 1857 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TDRD6O60522 2096 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 MBTPS2O43462 519 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MC3RP41968 323 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 RGS19P49795 217 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HYAL4Q2M3T9 481 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MAMSTRQ6ZN01 415 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HSD11B1LQ7Z5J1 315 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 LYG2Q86SG7 212 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR9A2Q8NGT5 310 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 C19orf43Q9BQ61 176 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SLC17A5Q9NRA2 495 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR2W5A6NFC9 320 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 PTHLHP12272 177 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 DPP4P27487 766 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SERPINF1P36955 418 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MAP3K8P41279 467 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR2AP1Q8NGE2 309 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR1J1Q8NGS3 322 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HIST1H2BAQ96A08 127 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SEBOXQ9HB31 216 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 UBE2CO00762 179 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TMPRSS11DO60235 418 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 SLC34A2O95436 690 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CXCL14O95715 111 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 F2P00734 622 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TACR3P29371 465 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 FRKP42685 505 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 DLK2Q6UY11 383 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 JAGN1Q8N5M9 183 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 PFN4Q8NHR9 129 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 NKD1Q969G9 470 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 PIK3IP1Q96FE7 263 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GPR55Q9Y2T6 319 aaPredicted RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 PCDHGA1Q9Y5H4 931 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 WIF1Q9Y5W5 379 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 FOCADQ5VW36 1801 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TRIOBPQ9H2D6 2365 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 A0A1B0GV50 99 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 BSGP35613 385 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 UBE2KP61086 200 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 OR1J2Q8NGS2 313 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CWH43Q9H720 699 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 CYP8B1Q9UNU6 501 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 MRPS33Q9Y291 106 aaKnown RBP4.61□□□□□ -1.67
HERC1-201ENST00000443617 POMT1Q9Y6A1 747 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 IGLV3-16A0A075B6K0 115 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 TMEM202A6NGA9 273 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 GLTPD2A6NH11 291 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 YIF1AO95070 293 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 HLA-DQA2P01906 255 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 DAOP14920 347 aa4.61□□□□□ -1.67
HERC1-201ENST00000443617 ARHGAP19Q14CB8 494 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms