RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SULT1C4O75897 302 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 PLGP00747 810 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 CELA2AP08217 269 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CCL3P10147 92 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF12P17014 697 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 MAPK3P27361 379 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 CD40LGP29965 261 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SDC2P34741 201 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 OPRL1P41146 370 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TGM4P49221 684 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 MTNR1BP49286 362 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 LIMK1P53667 647 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 DEFA1P59665 94 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 DEFA3P59666 94 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 GLO1Q04760 184 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 EGR3Q06889 387 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ATP1A4Q13733 1029 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TBC1D25Q3MII6 688 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TMEM176BQ3YBM2 270 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 MESTQ5EB52 335 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 BICRALQ6AI39 1079 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TMEM225Q6GV28 225 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TPRA1Q86W33 373 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 YIPF7Q8N8F6 280 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 MINDY2Q8NBR6 621 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 OR51L1Q8NGJ5 315 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF519Q8TB69 540 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ACOT12Q8WYK0 555 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TMEM203Q969S6 136 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TIGARQ9NQ88 270 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 STMN3Q9NZ72 180 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 FER1L5A0AVI2 2057 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 GABRPO00591 440 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 RGS5O15539 181 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SLC16A7O60669 478 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 PMS2P2O95744 297 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 IGHG1P01857 330 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CLUP10909 449 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF43P17038 809 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CNR1P21554 472 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 RANBP1P43487 201 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 BMXP51813 675 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CLRN1P58418 232 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 GPR85P60893 370 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 POU3F1Q03052 451 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF85Q03923 595 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SLC3A1Q07837 685 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 MYBPHQ13203 477 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TP53I3Q53FA7 332 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 DDI2Q5TDH0 399 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 C1QL3Q5VWW1 255 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 B3GLCTQ6Y288 498 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZFP41Q8N8Y5 198 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 OR14L1PQ8NHC6 308 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 NEIL3Q8TAT5 605 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SFXN2Q96NB2 322 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 DDOQ99489 341 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 FAM173AQ9BQD7 235 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 MESP1Q9BRJ9 268 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SLIRPQ9GZT3 109 aaKnown RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 SYT4Q9H2B2 425 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 KCNG2Q9UJ96 466 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 B9D1Q9UPM9 204 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 POLR1DQ9Y2S0 133 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 RALGAPA1Q6GYQ0 2036 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 KMT2EQ8IZD2 1858 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 IQCMA0A1B0GVH7 501 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 OGG1O15527 345 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 PLPP2O43688 288 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SELENOFO60613 162 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ADRA2AP08913 450 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TCEA1P23193 301 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 GDI2P50395 445 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 RAC1P63000 192 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 PPP3R1P63098 170 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SIRPAP78324 504 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 CD200R1LQ6Q8B3 271 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TMPPEQ6ZT21 453 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 PM20D2Q8IYS1 436 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 POC1BQ8TC44 478 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ASB10Q8WXI3 467 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TM9SF4Q92544 642 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 NXF2Q9GZY0 626 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 PARD6AQ9NPB6 346 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 KLF13Q9Y2Y9 288 aaPredicted RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 MRPS18CQ9Y3D5 142 aaKnown RBP5.42□□□□□ -1.54
VPS50-205ENST00000441602 TRBV2A0A0J9YWF9 115 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SLC22A23A1A5C7 686 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 NPIPA2E9PIF3 369 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 NPIPA3F8WFD2 350 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 ADAM10O14672 748 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 FZD7O75084 574 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 TMEM127O75204 238 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SPARCP09486 303 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 IFNGR1P15260 489 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 SFTPDP35247 375 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 NBL1P41271 181 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 PPP5CP53041 499 aa5.42□□□□□ -1.54
VPS50-205ENST00000441602 OR12D2P58182 307 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms