RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 TMEM33P57088 247 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 LMO4P61968 165 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 C1DQ13901 141 aaKnown RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 LARS2Q15031 903 aaKnown RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 EPGNQ6UW88 154 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 C6orf89Q6UWU4 347 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 PEG10Q86TG7 708 aaKnown RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 LRP11Q86VZ4 500 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 OR51F2Q8NH61 342 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 ZNF417Q8TAU3 575 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 C10orf82Q8WW14 230 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 ZNF587Q96SQ5 575 aaPredicted RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 SYT3Q9BQG1 590 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 CCDC28BQ9BUN5 200 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 SPATA9Q9BWV2 254 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 TCF7L2Q9NQB0 619 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 AIG1Q9NVV5 245 aa11.21□□□□□ -0.61
SP4-203ENST00000440636 MYEF2Q9P2K5 600 aaKnown RBP11.21□□□□□ -0.61
SP4-203ENST00000440636 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 M0R3G1 203 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 RFXANKO14593 260 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 RP2O75695 350 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 NCR1O76036 304 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 PNPP00491 289 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 AVPP01185 164 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 EPHA1P21709 976 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 STX1BP61266 288 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
SP4-203ENST00000440636 HOXC5Q00444 222 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 MAD2L1BPQ15013 274 aaPredicted RBP11.2□□□□□ -0.62
SP4-203ENST00000440636 FXNQ16595 210 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 GSG1Q2KHT4 349 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 REP15Q6BDI9 236 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
SP4-203ENST00000440636 ZNF627Q7L945 461 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 C20orf196Q8IYI0 205 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 TAAR8Q969N4 342 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 SLC35B4Q969S0 331 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 RBM4Q9BWF3 364 aaKnown RBP11.2□□□□□ -0.62
SP4-203ENST00000440636 G6PC2Q9NQR9 355 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 ZNF224Q9NZL3 707 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 ZNF232Q9UNY5 417 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 GPR45Q9Y5Y3 372 aa11.2□□□□□ -0.62
SP4-203ENST00000440636 IGKV1D-42A0A075B6H8 117 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 LOC105371242A0A075B767 164 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 TRAV20A0A0B4J274 112 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 A0A0G2JPF8 293 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 HNRNPCL2B2RXH8 293 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 HNRNPCL3B7ZW38 293 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 SDHDO14521 159 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 PPIHO43447 177 aaKnown RBP11.19□□□□□ -0.62
SP4-203ENST00000440636 AKAP8O43823 692 aaKnown RBP11.19□□□□□ -0.62
SP4-203ENST00000440636 OR2T1O43869 369 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 HNRNPCL1O60812 293 aaKnown RBP11.19□□□□□ -0.62
SP4-203ENST00000440636 HPRP00739 348 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 HNRNPCL4P0DMR1 293 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 NAT2P11245 290 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 CD79AP11912 226 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 EPHA3P29320 983 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 GRPRP30550 384 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 CRATP43155 626 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 DSTNP60981 165 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 PIGFQ07326 219 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 TRMT5Q32P41 509 aaKnown RBP11.19□□□□□ -0.62
SP4-203ENST00000440636 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 CARD17Q5XLA6 110 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 CCDC121Q6ZUS5 278 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 H1FNTQ75WM6 255 aaPredicted RBP11.19□□□□□ -0.62
SP4-203ENST00000440636 WDFY1Q8IWB7 410 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 ADPRHL1Q8NDY3 354 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 LRR1Q96L50 414 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 C12orf10Q9HB07 376 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 FZR1Q9UM11 496 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 IFT52Q9Y366 437 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 NOX1Q9Y5S8 564 aa11.19□□□□□ -0.62
SP4-203ENST00000440636 MS4A18H0YCH9 400 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 HLA-DOBP13765 273 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 B4GALT1P15291 398 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 LIMS1P48059 325 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 GIPRP48546 466 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
SP4-203ENST00000440636 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
SP4-203ENST00000440636 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 MFSD13AQ14CX5 517 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 ZSCAN26Q16670 478 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 MS4A18Q3C1V0 323 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 GTDC1Q4AE62 458 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 ZNF311Q5JNZ3 666 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 C5orf46Q6UWT4 87 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 NHLRC1Q6VVB1 395 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 ZNF813Q6ZN06 617 aa11.18□□□□□ -0.62
SP4-203ENST00000440636 TRPM8Q7Z2W7 1104 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms