RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF813Q6ZN06 617 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF837Q96EG3 531 aaPredicted RBP17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 TXNDC15Q96J42 360 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 SLC19A3Q9BZV2 496 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 ARMCX1Q9P291 453 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 SONP18583 2426 aaKnown RBP17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 VSTM5A8MXK1 200 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 FAM220BPB1ANY3 271 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 CELA3BP08861 270 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 B4GALT1P15291 398 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 CBR1P16152 277 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 SERPINF1P36955 418 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 GZMMP51124 257 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 PHYHD1Q5SRE7 291 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 LINC00114Q6XXX2 140 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 MDP1Q86V88 176 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 CALHM3Q86XJ0 350 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF525Q8N782 197 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 OR2T12Q8NG77 320 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 OR4F15Q8NGB8 312 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 RCN3Q96D15 328 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 TPD52L3Q96J77 140 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 LRR1Q96L50 414 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 PCDHAC1Q9H158 963 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 CRNNQ9UBG3 495 aaPredicted RBP17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF229Q9UJW7 825 aa17.27■□□□□ 0.36
SHROOM1-204ENST00000440118 ABCA2Q9BZC7 2435 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 SLC22A2O15244 555 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 SHOX2O60902 331 aaPredicted RBP17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 IGKV3-15P01624 115 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 IGLV1-44P01699 117 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 CSF3P09919 207 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 TNFRSF1BP20333 461 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 EFNA4P52798 201 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 GSG1Q2KHT4 349 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 SLC35D2Q76EJ3 337 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 ARPINQ7Z6K5 226 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 POU5F2Q8N7G0 328 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 FAM169BQ8N8A8 192 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 C10orf82Q8WW14 230 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 FAM168AQ92567 244 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 VRK1Q99986 396 aaPredicted RBP17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 SEC61A2Q9H9S3 476 aa17.26■□□□□ 0.35
SHROOM1-204ENST00000440118 IGHV4-30-2A0A087WSY4 118 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 MCIDASD6RGH6 385 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 RAB36O95755 333 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 HLA-HP01893 362 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 OR4A8P0C604 315 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CALCRP30988 508 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 IFNA8P32881 189 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CRYBA2P53672 197 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 MELKQ14680 651 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CARTPTQ16568 116 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CYBRD1Q53TN4 286 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 LRRC17Q8N6Y2 441 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 LZICQ8WZA0 190 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF566Q969W8 418 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 FOXB1Q99853 325 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 POLR2J2Q9GZM3 115 aaKnown RBP17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 POLR2J3Q9H1A7 115 aaKnown RBP17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CCDC134Q9H6E4 229 aa17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
SHROOM1-204ENST00000440118 B9A039 149 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 BLOC1S5-TXNDC5H3BN57 136 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 ENTPD5O75356 428 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 PDE5AO76074 875 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 OR5F1O95221 314 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 THY1P04216 161 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 ERCC1P07992 297 aaPredicted RBP17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 OR1E2P47887 323 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 PIGFQ07326 219 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 SNTB2Q13425 540 aaKnown RBP17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 DNM1P46Q6ZS02 220 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 TSPYL5Q86VY4 417 aaPredicted RBP17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 MICU2Q8IYU8 434 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 IL17RDQ8NFM7 739 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF583Q96ND8 569 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 FAM53CQ9NYF3 392 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 AP3M1Q9Y2T2 418 aa17.24■□□□□ 0.35
SHROOM1-204ENST00000440118 IGHV2OR16-5A0A0B4J2B6 119 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 A0A1W2PRG6 482 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 ELOVL7A1L3X0 281 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 ZNF503-AS2A6NEH8 195 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 GSTA4O15217 222 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 CCDC22O60826 627 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 LY6HO94772 140 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 LYPD3O95274 346 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 BCL10O95999 233 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 MT-ND1P03886 318 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 SLC25A16P16260 332 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 LSP1P33241 339 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 MDH1P40925 334 aaKnown RBP17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 RBM34P42696 430 aaKnown RBP17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 CLRN1P58418 232 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 ADIPOQQ15848 244 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 KRT80Q6KB66 452 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 HDDC2Q7Z4H3 204 aa17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 MYPOPQ86VE0 399 aaPredicted RBP17.23■□□□□ 0.35
SHROOM1-204ENST00000440118 NUP37Q8NFH4 326 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms