RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 KPNA2P52292 529 aaKnown RBP2.35□□□□□ -2.03
VPS41-207ENST00000439468 CRYBB1P53674 252 aaPredicted RBP2.35□□□□□ -2.03
VPS41-207ENST00000439468 OGDHQ02218 1023 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 PPIL2Q13356 520 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 KCTD21Q4G0X4 260 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 C2orf83Q53S99 150 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 GPR157Q5UAW9 335 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 CTRB2Q6GPI1 263 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 ACP7Q6ZNF0 438 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 GDPD3Q7L5L3 318 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 PIANPQ8IYJ0 282 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 TMEM61Q8N0U2 210 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 TPRX1Q8N7U7 411 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 OR10G3Q8NGC4 313 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 OR51S1Q8NGJ8 323 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 OR13C2Q8NGS9 318 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 MYDGFQ969H8 173 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 HIST1H4GQ99525 98 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 HES7Q9BYE0 225 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 METTL7AQ9H8H3 244 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 SGK2Q9HBY8 427 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 ZFP14Q9HCL3 533 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 CLCF1Q9UBD9 225 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 SUN2Q9UH99 717 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 CTNNA3Q9UI47 895 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 ASF1AQ9Y294 204 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 NEUROG3Q9Y4Z2 214 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 ASXL1Q8IXJ9 1541 aa2.35□□□□□ -2.03
VPS41-207ENST00000439468 NOTCH2Q04721 2471 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ABCA3Q99758 1704 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 CDC42BPBQ9Y5S2 1711 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 MLH3Q9UHC1 1453 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 VIRMAQ69YN4 1812 aaKnown RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 A0A1W2PPV9 198 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 PCP4L1A6NKN8 68 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 GJE1A6NN92 205 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 HAS3O00219 553 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 AGPAT2O15120 278 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 OR7A10O76100 309 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 CLDN9O95484 217 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 KLF8O95600 359 aaPredicted RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 KRT6AP02538 564 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 MMP1P03956 469 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ZNF17P17021 662 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ARRB1P49407 418 aaPredicted RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 TAS2R19P59542 299 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 HMGN5P82970 282 aaKnown RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 ACVR1Q04771 509 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ASPHQ12797 758 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 DDX39BQ13838 428 aaKnown RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 ATP6AP1Q15904 470 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 NRF1Q16656 503 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 IMMTQ16891 758 aaKnown RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 RNF165Q6ZSG1 346 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ASCL5Q7RTU5 278 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ZNF546Q86UE3 836 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 SLC22A9Q8IVM8 553 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 OR2L3Q8NG85 312 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 OR6C4Q8NGE1 309 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ACER1Q8TDN7 264 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 UCN3Q969E3 161 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 MBOAT4Q96T53 435 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 CNN2Q99439 309 aaKnown RBP2.34□□□□□ -2.03
VPS41-207ENST00000439468 FAIM2Q9BWQ8 316 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 ANKRD19PQ9H560 264 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 SLC25A22Q9H936 323 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 LY9Q9HBG7 655 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 NMRAL1Q9HBL8 299 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 GIN1Q9NXP7 522 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 QPCTLQ9NXS2 382 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 KCNIP1Q9NZI2 227 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 COX16Q9P0S2 106 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 TMCO1Q9UM00 188 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 RABL2BQ9UNT1 228 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 SAMD9Q5K651 1589 aa2.34□□□□□ -2.03
VPS41-207ENST00000439468 A0A0C4DFX4 3053 aa2.34□□□□□ -2.04
VPS41-207ENST00000439468 SPTBN5Q9NRC6 3674 aaKnown RBP2.34□□□□□ -2.04
VPS41-207ENST00000439468 TET3O43151 1660 aa2.34□□□□□ -2.04
VPS41-207ENST00000439468 NCOA2Q15596 1464 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 FAM135AQ9P2D6 1515 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 CICQ96RK0 1608 aaPredicted RBP2.33□□□□□ -2.04
VPS41-207ENST00000439468 SYNJ2BP-COX16A0A087WUM0 186 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 SNX4O95219 450 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 C1orf105O95561 183 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 CT62P0C5K7 136 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 ABOP16442 354 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 RCC1P18754 421 aaPredicted RBP2.33□□□□□ -2.04
VPS41-207ENST00000439468 MX1P20591 662 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 IL12AP29459 219 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 NUDT1P36639 197 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 RPS10P46783 165 aaKnown RBP2.33□□□□□ -2.04
VPS41-207ENST00000439468 DLX1P56177 255 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 ENPEPQ07075 957 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 SCRN3Q0VDG4 424 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 CAPRIN1Q14444 709 aaKnown RBP2.33□□□□□ -2.04
VPS41-207ENST00000439468 ZNF77Q15935 545 aa2.33□□□□□ -2.04
VPS41-207ENST00000439468 BOLA3Q53S33 107 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms