RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NIPAL3Q6P499 406 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 Q6ZS52 159 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MUC20Q8N307 709 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 NAXEQ8NCW5 288 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 DIO2Q92813 273 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC22A18Q96BI1 424 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MRGPRX1Q96LB2 322 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 TRPV4Q9HBA0 871 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM60AQ9NP50 221 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 COMMD9Q9P000 198 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 KLHL9Q9P2J3 617 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 MSRAQ9UJ68 235 aa9.1□□□□□ -0.95
CDC42SE1-202ENST00000439374 A0A0B4J2A0 478 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 CASC3O15234 703 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 CSTAP01040 98 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ST6GAL1P15907 406 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 AKR1C4P17516 323 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 C4BPBP20851 252 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZP3P21754 424 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 AKT2P31751 481 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 CTHP32929 405 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 LSSP48449 732 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 MTNR1BP49286 362 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ART1P52961 327 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 GAS1P54826 345 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ETV3LQ6ZN32 361 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMPRSS9Q7Z410 1059 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 BMFQ96LC9 184 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 KIR3DX1Q9H7L2 352 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 SCPEP1Q9HB40 452 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ASB6Q9NWX5 421 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 LYARQ9NX58 379 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 SHPKQ9UHJ6 478 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 HEBP2Q9Y5Z4 205 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC33A1O00400 549 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 AKR7A3O95154 331 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ATP1B1P05026 303 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 SBK2P0C263 348 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZGLP1P0C6A0 271 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 THEGLP0DJG4 465 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF3P17036 446 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 HNRNPA2B1P22626 353 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 MNDAP41218 407 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 EIF1AXP47813 144 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR1D4P47884 311 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ARFIP1P53367 373 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ALG11Q2TAA5 492 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 METTL11BQ5VVY1 283 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 NKAIN2Q5VXU1 208 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM92Q6UXU6 159 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 LRRC69Q6ZNQ3 347 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 DGAT2L6Q6ZPD8 337 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 GLB1L2Q8IW92 636 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 LNX2Q8N448 690 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZPLD1Q8TCW7 415 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 MED18Q9BUE0 208 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 RSRP1Q9BUV0 290 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 NKX6-2Q9C056 277 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ATG5Q9H1Y0 275 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 GSKIPQ9P0R6 139 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 ADAM29Q9UKF5 820 aa9.09□□□□□ -0.95
CDC42SE1-202ENST00000439374 SERPINA3P01011 423 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 THY1P04216 161 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 AMY2AP04746 511 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 DAOP14920 347 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 FCARP24071 287 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 THBS2P35442 1172 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 EMDP50402 254 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 KRBOX4Q5JUW0 171 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 C1orf189Q5VU69 101 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC22A10Q63ZE4 541 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 MBOAT2Q6ZWT7 520 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR6N2Q8NGY6 317 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 BRIX1Q8TDN6 353 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 LMX1AQ8TE12 382 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 APOBEC4Q8WW27 367 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZC3HAV1LQ96H79 300 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 LRIT1Q9P2V4 623 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZMIZ1Q9ULJ6 1067 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLC17A4Q9Y2C5 497 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 A0A1B0GWA3 101 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 IRGMA1A4Y4 181 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 C7orf66A4D0T2 115 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 D6RAR5 112 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 KCNJ13O60928 360 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 RBBP9O75884 186 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 RCBTB2O95199 551 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SEMA4FO95754 770 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms