RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KRR1Q13601 381 aaKnown RBP11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ATCAYQ86WG3 371 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 KDM8Q8N371 416 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF843Q8N446 348 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 C9orf106Q8NAJ2 232 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 OR8J1Q8NGP2 316 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 CYGBQ8WWM9 190 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 PLEKHA8Q96JA3 519 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 Q96M85 177 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 OR2M2Q96R28 347 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 ANKRD60Q9BZ19 345 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 IMPAD1Q9NX62 359 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 NOSIPQ9Y314 301 aaKnown RBP11.27□□□□□ -0.61
SCLT1-202ENST00000439369 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 LAMA5O15230 3695 aa11.27□□□□□ -0.61
SCLT1-202ENST00000439369 TEX13CA0A0J9YWL9 993 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 HSPB2A8KAH6 182 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 HAX1O00165 279 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SLC43A1O75387 559 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 MRPL33O75394 65 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF432O94892 652 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 CNOT4O95628 575 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 IL18BPO95998 194 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 GLI4P10075 376 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ACVR1BP36896 505 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 PCYT1AP49585 367 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 BIDP55957 195 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 CLDN17P56750 224 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SNRPGP62308 76 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 EFNB1P98172 346 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 TEKQ02763 1124 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 TLE1Q04724 770 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 TOP3AQ13472 1001 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 STK11Q15831 433 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 HSPB2Q16082 182 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SNAPC1Q16533 368 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SOWAHCQ53LP3 525 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 MESTQ5EB52 335 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF362Q5T0B9 420 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF691Q5VV52 312 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 MTFR2Q6P444 385 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 USP51Q70EK9 711 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 AAED1Q7RTV5 226 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 JAZF1Q86VZ6 243 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 IQCF1Q8N6M8 205 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 OR6K3Q8NGY3 331 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 FAM81AQ8TBF8 368 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF566Q969W8 418 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF385AQ96PM9 386 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 MRPL13Q9BYD1 178 aaKnown RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 MED29Q9NX70 200 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-202ENST00000439369 TINAGQ9UJW2 476 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
SCLT1-202ENST00000439369 ATRXP46100 2492 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 A0A1B0GUH1 482 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 PRSS37A4D1T9 235 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TRMUO75648 421 aaKnown RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 SERPINI2O75830 405 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 RENP00797 406 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 PGA4P0DJD7 388 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 PGA3P0DJD8 388 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 HIST1H1CP16403 213 aaKnown RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 SLC25A1P53007 311 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 PER3P56645 1201 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 ITGADQ13349 1161 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 HIST3H3Q16695 136 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 THEM4Q5T1C6 240 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 C6orf52Q5T4I8 152 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 MEDAGQ5VYS4 303 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 DNM1P34Q6PK57 102 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TUSC5Q8IXB3 177 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 C8orf59Q8N0T1 100 aaPredicted RBP11.25□□□□□ -0.61
SCLT1-202ENST00000439369 FAM26EQ8N5C1 309 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 POMGNT2Q8NAT1 580 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 NPEPL1Q8NDH3 523 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 NOXO1Q8NFA2 376 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TMEM163Q8TC26 289 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 RASD2Q96D21 266 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TXNDC15Q96J42 360 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 B3GAT2Q9NPZ5 323 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
SCLT1-202ENST00000439369 OSGIN2Q9Y236 505 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms