RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 IFT46Q9NQC8 304 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 TXNL4BQ9NX01 149 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PLXNA3P51805 1871 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CEP250Q9BV73 2442 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 AKR7A2O43488 359 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 WNT1P04628 370 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 PIPP12273 146 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GIFP27352 417 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPR50Q13585 617 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 FAM209AQ5JX71 171 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 C1orf140Q5VVS0 124 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR7E24Q6IFN5 339 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 LSRQ86X29 649 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 NANOGP1Q8N7R0 232 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 SIMC1Q8NDZ2 872 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPR148Q8TDV2 347 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 ELMOD3Q96FG2 381 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 DHRS1Q96LJ7 313 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 CES1P1Q9UKY3 287 aa10.58□□□□□ -0.72
TRAPPC9-202ENST00000438773 GJE1A6NN92 205 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SBK2P0C263 348 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 FOXC1Q12948 553 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 CDK10Q15131 360 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRSS53Q2L4Q9 553 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 GLYR1Q49A26 553 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 RAB12Q6IQ22 244 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 BBS1Q8NFJ9 593 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR4D11Q8NGI4 311 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR4C15Q8NGM1 316 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 C15orf40Q8WUR7 153 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 ANKRD9Q96BM1 317 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 PGAM5Q96HS1 289 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 HIST1H2AAQ96QV6 131 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 MICU1Q9BPX6 476 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC25A18Q9H1K4 315 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 NOP16Q9Y3C1 178 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR14I1A6ND48 311 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 FFAR1O14842 300 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 HIST1H1CP16403 213 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 DPP4P27487 766 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 GDF1P27539 372 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 MELKQ14680 651 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 CLPPQ16740 277 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRTGQ2VWP7 1150 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SMUG1Q53HV7 270 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 LRRN1Q6UXK5 716 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 PLCZ1Q86YW0 608 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 TRMT10AQ8TBZ6 339 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 CHAC2Q8WUX2 184 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 GHSRQ92847 366 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF775Q96BV0 537 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SCARF2Q96GP6 870 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 DUSP15Q9H1R2 295 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A0C4DFX4 3053 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 FRG2CA6NGY1 282 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SPDEFO95238 335 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 UCHL1P09936 223 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 CFL1P23528 166 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 PNLIPRP2P54317 469 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF79Q15937 498 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 KLHL26Q53HC5 615 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM69Q5SWH9 247 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC22A10Q63ZE4 541 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 C5orf46Q6UWT4 87 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR1J4Q8NGS1 313 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM41AQ96HV5 264 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR11A1Q9GZK7 315 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 WWTR1Q9GZV5 400 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC25A19Q9HC21 320 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 TAS2R3Q9NYW6 316 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
TRAPPC9-202ENST00000438773 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 ALDOBP05062 364 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 PER3P56645 1201 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 RNF4P78317 190 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR1N1Q8NGS0 311 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 RNASE11Q8TAA1 199 aaKnown RBP10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 GIMAP5Q96F15 307 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 SARGQ9BW04 601 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 ELOVL3Q9HB03 270 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 RASD1Q9Y272 281 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 C4orf47A7E2U8 309 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF208O43345 1280 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CYB5AP00167 134 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 PRKACAP17612 351 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 SIRPAP78324 504 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 BEX5Q5H9J7 111 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 QSOX2Q6ZRP7 698 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 GALNT11Q8NCW6 608 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR13C3Q8NGS6 347 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR52N1Q8NH53 320 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CPNE2Q96FN4 548 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 LAT2Q9GZY6 243 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms