RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 GID8Q9NWU2 228 aa15.24■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF229Q9UJW7 825 aa15.24■□□□□ 0.03
SBDSP1-203ENST00000437201 FBXL3Q9UKT7 428 aa15.24■□□□□ 0.03
SBDSP1-203ENST00000437201 SLC7A7Q9UM01 511 aa15.24■□□□□ 0.03
SBDSP1-203ENST00000437201 SPEF1Q9Y4P9 236 aa15.24■□□□□ 0.03
SBDSP1-203ENST00000437201 SERPINI2O75830 405 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 CH25HO95992 272 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 NPR2P20594 1047 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 CSNK1A1P48729 337 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 PDLIM4P50479 330 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 GZMMP51124 257 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 ZP4Q12836 540 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 NPRL3Q12980 569 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 CAMK2DQ13557 499 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF74Q16587 644 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 GSG1Q2KHT4 349 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 VHLLQ6RSH7 139 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 NHLRC1Q6VVB1 395 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF813Q6ZN06 617 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 MDP1Q86V88 176 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 PRIMA1Q86XR5 153 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 OR6X1Q8NH79 312 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 VRK1Q99986 396 aaPredicted RBP15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 PLK3Q9H4B4 646 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 FGFR1OP2Q9NVK5 253 aa15.23■□□□□ 0.03
SBDSP1-203ENST00000437201 A8MV72 311 aaPredicted RBP15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 LRRN3E7EW58 273 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 C11orf98E9PRG8 122 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 MRASO14807 208 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 RNF13O43567 381 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 UMPSP11172 480 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 CD79AP11912 226 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 IFNGR1P15260 489 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 CALCRP30988 508 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 PPOXP50336 477 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 BIDP55957 195 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 KLF10Q13118 480 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 TMEM249Q2WGJ8 235 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 RABL3Q5HYI8 236 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 PHYHD1Q5SRE7 291 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 SLC35D2Q76EJ3 337 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 PIWIL3Q7Z3Z3 882 aaKnown RBP15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 CALHM3Q86XJ0 350 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 RBM45Q8IUH3 476 aaKnown RBP15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF540Q8NDQ6 660 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 FOXB1Q99853 325 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF426Q9BUY5 554 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 B3GNT2Q9NY97 397 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 SH3GLB1Q9Y371 365 aa15.22■□□□□ 0.03
SBDSP1-203ENST00000437201 IGHV2OR16-5A0A0B4J2B6 119 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 SLC22A2O15244 555 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 SEC14L2O76054 403 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 UBL3O95164 117 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 RAB36O95755 333 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 CELA3BP08861 270 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 USF1P22415 310 aaPredicted RBP15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 RBM34P42696 430 aaKnown RBP15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 TAS2R41P59536 307 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 VLDLRP98155 873 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 HGFACQ04756 655 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 DAG1Q14118 895 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 HSP90B2PQ58FF3 399 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 REP15Q6BDI9 236 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 WDR88Q6ZMY6 472 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 HDDC2Q7Z4H3 204 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 OR4D11Q8NGI4 311 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 ZNF566Q969W8 418 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 SLC25A44Q96H78 314 aaPredicted RBP15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 SORCS2Q96PQ0 1159 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 PIMREGQ9BSJ6 248 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 SAR1AQ9NR31 198 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 TAS2R5Q9NYW4 299 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 GLTPQ9NZD2 209 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 AP3M1Q9Y2T2 418 aa15.21■□□□□ 0.03
SBDSP1-203ENST00000437201 A0A096LNT2 108 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 LOC390937A0A1W2PQ73 354 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 KPNA4O00629 521 aaPredicted RBP15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 LYPD3O95274 346 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 IFNA2P01563 188 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 HLA-HP01893 362 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 THY1P04216 161 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 ASAH2BP0C7U1 165 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 B4GALT1P15291 398 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 IFNA8P32881 189 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 LSP1P33241 339 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 THBS4P35443 961 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 CYB5R2Q6BCY4 276 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 NANOGNBQ7Z5D8 188 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 DPPA2Q7Z7J5 298 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 CARM1Q86X55 608 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 HIPK1Q86Z02 1210 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 C10orf82Q8WW14 230 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 NEU4Q8WWR8 484 aaPredicted RBP15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 TMEM54Q969K7 222 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 SEC61A2Q9H9S3 476 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 CMAHPQ9Y471 501 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 CAPN7Q9Y6W3 813 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 JMJD1CQ15652 2540 aa15.2■□□□□ 0.02
SBDSP1-203ENST00000437201 LOC100653049A0A140TA62 436 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms