RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CCDC86Q9H6F5 360 aaKnown RBP19■□□□□ 0.63
PTPRF-207ENST00000436724 ZFHX4Q86UP3 3567 aa19■□□□□ 0.63
PTPRF-207ENST00000436724 MS4A18H0YCH9 400 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 SPNP16150 400 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 DNASE1L1P49184 302 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 EIF2B2P49770 351 aaKnown RBP18.99■□□□□ 0.63
PTPRF-207ENST00000436724 LGALS3BPQ08380 585 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 GGTLC2Q14390 218 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 MELKQ14680 651 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 MS4A18Q3C1V0 323 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 GPR139Q6DWJ6 353 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 PM20D2Q8IYS1 436 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 OR6V1Q8N148 313 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 ARIH2OSQ8N7S6 290 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 SLC39A7Q92504 469 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 HPS1Q92902 700 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 NTNG2Q96CW9 530 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 KCNS3Q9BQ31 491 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 NDEL1Q9GZM8 345 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 STUB1Q9UNE7 303 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 SF3B6Q9Y3B4 125 aaKnown RBP18.99■□□□□ 0.63
PTPRF-207ENST00000436724 A0A1W2PNR3 127 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 AKR7A3O95154 331 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 SFTPDP35247 375 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 ACVR1BP36896 505 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 RPS19P39019 145 aaKnown RBP18.99■□□□□ 0.63
PTPRF-207ENST00000436724 POU4F2Q12837 409 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 C3orf33Q6P1S2 294 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 TMPRSS11AQ6ZMR5 421 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF227Q86WZ6 799 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 DND1Q8IYX4 353 aaKnown RBP18.99■□□□□ 0.63
PTPRF-207ENST00000436724 OR1J4Q8NGS1 313 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 NXPE2Q96DL1 559 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 NUAK2Q9H093 628 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 ISYNA1Q9NPH2 558 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 ZMIZ1Q9ULJ6 1067 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 SIRT4Q9Y6E7 314 aaPredicted RBP18.99■□□□□ 0.63
PTPRF-207ENST00000436724 MED13Q9UHV7 2174 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 GVINP1Q7Z2Y8 2422 aa18.99■□□□□ 0.63
PTPRF-207ENST00000436724 CFAP47Q6ZTR5 3102 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 A0A075B6Q4 140 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 LIPT2A6NK58 231 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 E9PI62 339 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SNPHO15079 494 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 AKAP8O43823 692 aaKnown RBP18.98■□□□□ 0.63
PTPRF-207ENST00000436724 GLCEO94923 617 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 LIFP15018 202 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 DPP4P27487 766 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 OR12D2P58182 307 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 RPL27P61353 136 aaKnown RBP18.98■□□□□ 0.63
PTPRF-207ENST00000436724 PUDPQ08623 228 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 DCAF10Q5QP82 559 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 LCN1P1Q5VSP4 162 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 RAB43Q86YS6 212 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 C4orf36Q96KX1 117 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SGCZQ96LD1 299 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SDHCQ99643 169 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SERINC1Q9NRX5 453 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 STMN3Q9NZ72 180 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 FREM3P0C091 2139 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 FAM47E-STBD1D6RA91 191 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 GPANK1O95872 356 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SLC25A1P53007 311 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 GPR85P60893 370 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 RUNX1T1Q06455 604 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SLC35D3Q5M8T2 416 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 VASNQ6EMK4 673 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 H1FNTQ75WM6 255 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-207ENST00000436724 SLC35F2Q8IXU6 374 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 POMGNT2Q8NAT1 580 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF519Q8TB69 540 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 OR5B2Q96R09 309 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 DCLRE1CQ96SD1 692 aaKnown RBP18.98■□□□□ 0.63
PTPRF-207ENST00000436724 BARHL1Q9BZE3 327 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 TXNIPQ9H3M7 391 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 INPP5EQ9NRR6 644 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 BABAM2Q9NXR7 383 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 COPS3Q9UNS2 423 aa18.98■□□□□ 0.63
PTPRF-207ENST00000436724 J3QLW9 94 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 XKRYO14609 159 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 ZNF19P17023 458 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 OC90Q02509 493 aaPredicted RBP18.97■□□□□ 0.63
PTPRF-207ENST00000436724 TLE3Q04726 772 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 INSL4Q14641 139 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 ATP1A1-AS1Q5TC04 95 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 TIGD3Q6B0B8 471 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 WDFY1Q8IWB7 410 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 OR6S1Q8NH40 331 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 PRRX2Q99811 253 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 TMED9Q9BVK6 235 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 POTEKPQ9BYX7 375 aa18.97■□□□□ 0.63
PTPRF-207ENST00000436724 PAIP2BQ9ULR5 123 aaKnown RBP18.97■□□□□ 0.63
PTPRF-207ENST00000436724 SNX4O95219 450 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 ACSM1Q08AH1 577 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 OTPQ5XKR4 325 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 RPTNQ6XPR3 784 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 GDPGP1Q6ZNW5 385 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 TMPRSS12Q86WS5 348 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 C5orf34Q96MH7 638 aa18.96■□□□□ 0.63
PTPRF-207ENST00000436724 FOXN4Q96NZ1 517 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms