RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 RNF6Q9Y252 685 aa11.96□□□□□ -0.49
RPE-208ENST00000436630 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 BSNQ9UPA5 3926 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ZNF726A6NNF4 738 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 PRR23D1E9PI22 279 aaPredicted RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 PRKYO43930 277 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 RAMP1O60894 148 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 SERPINI2O75830 405 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 CLIC3O95833 236 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 PLGP00747 810 aaPredicted RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 PRR23D2P0DMB1 279 aaPredicted RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 GABRB1P18505 474 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ACVR2AP27037 513 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ACVR1BP36896 505 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 SLC25A1P53007 311 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 EFNB1P98172 346 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ITGADQ13349 1161 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 TMED1Q13445 227 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 OCLNQ16625 522 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 C1orf185Q5T7R7 199 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 NXNL2Q5VZ03 156 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 DNM1P34Q6PK57 102 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 NHLRC1Q6VVB1 395 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 CD163Q86VB7 1156 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 KDM8Q8N371 416 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 TCEANCQ8N8B7 351 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ST6GALNAC3Q8NDV1 305 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 OR52E2Q8NGJ4 325 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 CPT1CQ8TCG5 803 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ABHD3Q8WU67 409 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ROBO4Q8WZ75 1007 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ZNF566Q969W8 418 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 RASD2Q96D21 266 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 SLC25A44Q96H78 314 aaPredicted RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 CLN6Q9NWW5 311 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 ZNF346Q9UL40 294 aaKnown RBP11.95□□□□□ -0.5
RPE-208ENST00000436630 BLOC1S6Q9UL45 172 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 FLVCR1Q9Y5Y0 555 aa11.95□□□□□ -0.5
RPE-208ENST00000436630 SHANK1Q9Y566 2161 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CHD6Q8TD26 2715 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 PRSS37A4D1T9 235 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 KDM4EB2RXH2 506 aaPredicted RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 PRODHO43272 600 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 TLX2O43763 284 aaPredicted RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 HLA-DOBP13765 273 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 KLK2P20151 261 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CENPAP49450 140 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CASP6P55212 293 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 BIDP55957 195 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CLDN17P56750 224 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CXCR4P61073 352 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 LGALS3BPQ08380 585 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CD47Q08722 323 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 NFATC3Q12968 1075 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CRMP1Q14194 572 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 MESTQ5EB52 335 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 SLC35F1Q5T1Q4 408 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 ZNF585AQ6P3V2 769 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 LEG1Q6P5S2 330 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 CXXC5Q7LFL8 322 aaKnown RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 MED12LQ86YW9 2145 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 SLC37A3Q8NCC5 494 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 SDR9C7Q8NEX9 313 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 OR2T4Q8NH00 348 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 OR4K13Q8NH42 304 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 HDAC2Q92769 488 aaKnown RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 INTS12Q96CB8 462 aaKnown RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 LRR1Q96L50 414 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 TRIB1Q96RU8 372 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPE-208ENST00000436630 ZNF835Q9Y2P0 537 aa11.94□□□□□ -0.5
RPE-208ENST00000436630 PHF3Q92576 2039 aaKnown RBP11.94□□□□□ -0.5
RPE-208ENST00000436630 RP1L1Q8IWN7 2480 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 IRGMA1A4Y4 181 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 MBD3L4A6NDZ8 208 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 MBD3L3A6NE82 208 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 MBD3L5A6NJ08 208 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 SLC22A31A6NKX4 558 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 ARHGEF9O43307 516 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 SLC19A2O60779 497 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 SS18L1O75177 396 aaPredicted RBP11.93□□□□□ -0.5
RPE-208ENST00000436630 SLC43A1O75387 559 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 AQP8O94778 261 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 CRHP06850 196 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 YES1P07947 543 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 CCDC159P0C7I6 412 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 CRABP1P29762 137 aa11.93□□□□□ -0.5
RPE-208ENST00000436630 BLVRAP53004 296 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms