RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF646O15015 1829 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PSMB11A5LHX3 300 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 GOLGA8OA6NCC3 632 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR5B21A6NL26 309 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 E7ENQ6 273 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 GOLGA8NF8WBI6 632 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF780AO75290 641 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 BBOX1O75936 387 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR7A10O76100 309 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 FGF1P05230 155 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC166P0CW27 439 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 SFTPCP11686 197 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC130P13994 396 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 ZNF43P17038 809 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 KITLGP21583 273 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 IL12AP29459 219 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 GYG1P46976 350 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 TPMTP51580 245 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 KPNA2P52292 529 aaKnown RBP2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PKNOX1P55347 436 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR5I1Q13606 314 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 GNMTQ14749 295 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 MICBQ29980 383 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PARP15Q460N3 678 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 CCDC14Q49A88 953 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 EOGTQ5NDL2 527 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 C1orf100Q5SVJ3 147 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 LCE3CQ5T5A8 94 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 Q6ZSR3 168 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 HSD17B13Q7Z5P4 300 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PAQR7Q86WK9 346 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 TPRX1Q8N7U7 411 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 NECAB1Q8N987 351 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR10H4Q8NGA5 316 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR10G3Q8NGC4 313 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR4K14Q8NGD5 310 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR51S1Q8NGJ8 323 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR52I1Q8NGK6 324 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR1L6Q8NGR2 347 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 OR9A1PQ8NGU1 263 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 MAIP1Q8WWC4 291 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 RAPGEF5Q92565 580 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 FGF14Q92915 247 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 CXorf40BQ96DE9 158 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 ITCHQ96J02 903 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 TECTBQ96PL2 329 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PANX2Q96RD6 677 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 MRPL45Q9BRJ2 306 aaKnown RBP2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 PRO3102Q9H379 93 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 RBKSQ9H477 322 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 LY9Q9HBG7 655 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 SLC7A8Q9UHI5 535 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 ITSN1Q15811 1721 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 RTL1A6NKG5 1358 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 TONSLQ96HA7 1378 aa2.22□□□□□ -2.05
HMGB1P27-201ENST00000431429 SCN4AP35499 1836 aa2.21□□□□□ -2.05
HMGB1P27-201ENST00000431429 VIRMAQ69YN4 1812 aaKnown RBP2.21□□□□□ -2.05
HMGB1P27-201ENST00000431429 IQANK1A0A1B0GTG1 560 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 A8MXQ7 604 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ADGRB1O14514 1584 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 LY75O60449 1722 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 UGT1A9O60656 530 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SNAPINO95295 136 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 C4AP0C0L4 1744 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 PSMB1P20618 241 aaKnown RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SHMT2P34897 504 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 FDFT1P37268 417 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SCRN3Q0VDG4 424 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SRSF5Q13243 272 aaKnown RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 IMMTQ16891 758 aaKnown RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 VAX1Q5SQQ9 334 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 C1orf146Q5VVC0 180 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF544Q6NX49 715 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 EDC4Q6P2E9 1401 aaKnown RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 KDM7AQ6ZMT4 941 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ARCQ7LC44 396 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 PKD1L3Q7Z443 1732 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 VRK2Q86Y07 508 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 NUDCD3Q8IVD9 361 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 TTC5Q8N0Z6 440 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 FTMTQ8N4E7 242 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 C14orf178Q8N769 122 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR4F6Q8NGB9 312 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 KCNG3Q8TAE7 436 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SERAC1Q96JX3 654 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 TCEANC2Q96MN5 208 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF641Q96N77 438 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 FMO2Q99518 471 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 HIST1H4GQ99525 98 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 MAPKAP1Q9BPZ7 522 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 CNPY3Q9BT09 278 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 NEUROG2Q9H2A3 272 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 PPA2Q9H2U2 334 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SH2D2AQ9NP31 389 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 THUMPD1Q9NXG2 353 aaKnown RBP2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 BFARQ9NZS9 450 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ABCG2Q9UNQ0 655 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 VSIG4Q9Y279 399 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 V9GY05 133 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms