RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ATG2AQ2TAZ0 1938 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TMEM72A0PK05 275 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 G3V3Q6 166 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 PRAMEF26H0Y7S4 382 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CREBL2O60519 120 aaPredicted RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 NDUFB6O95139 128 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 NSA2O95478 260 aaKnown RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CDK2P24941 298 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CENPAP49450 140 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 HSD17B7P56937 341 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TAS2R20P59543 309 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TSPAN5P62079 268 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 HHEXQ03014 270 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 EGR3Q06889 387 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CCINQ13939 588 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 POU4F3Q15319 338 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 DEFB110Q30KQ9 67 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TCTE1Q5JU00 501 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 SLC25A25Q6KCM7 469 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 LRRTM1Q86UE6 522 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 COMMD7Q86VX2 200 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ZNF227Q86WZ6 799 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 SERPINA12Q8IW75 414 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 C10orf53Q8N6V4 93 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ZNF615Q8N8J6 731 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 OR13H1Q8NG92 308 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ORAI1Q96D31 301 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 RBP7Q96R05 134 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CD93Q9NPY3 652 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 UBQLN4Q9NRR5 601 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TAS2R8Q9NYW2 309 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 MGAT4CQ9UBM8 478 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 KLK11Q9UBX7 282 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 KLF2Q9Y5W3 355 aaPredicted RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 TMEM212A6NML5 194 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 PRR32B1ATL7 298 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 PSMD9O00233 223 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 GLSO94925 669 aaPredicted RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 RPP14O95059 124 aaKnown RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 ABHD16AO95870 558 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 RENP00797 406 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ASAH2BP0C7U1 165 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 HPGDP15428 266 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 SSTR2P30874 369 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 RAD52P43351 418 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CLDN12P56749 244 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 PPP1CAP62136 330 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 SERTAD2Q14140 314 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 OPCMLQ14982 345 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TSC22D1Q15714 1073 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 GXYLT1Q4G148 440 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 FNDC7Q5VTL7 733 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 ZNF626Q68DY1 528 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 SLC22A8Q8TCC7 542 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 THEM6Q8WUY1 208 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CCDC74AQ96AQ1 378 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 KLHL15Q96M94 604 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 USB1Q9BQ65 265 aaKnown RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 GSX2Q9BZM3 304 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TSPAN10Q9H1Z9 355 aaPredicted RBP10.28□□□□□ -0.76
USP4-205ENST00000431357 MMP25Q9NPA2 562 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 FRRS1LQ9P0K9 344 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 MBD2Q9UBB5 411 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 GRHPRQ9UBQ7 328 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 LAMP5Q9UJQ1 280 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 CLDN16Q9Y5I7 305 aa10.28□□□□□ -0.76
USP4-205ENST00000431357 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 ANXA2P2A6NMY6 339 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 FAM171A2A8MVW0 826 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 XRCC3O43542 346 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 RBBP9O75884 186 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 OR2A4O95047 310 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SEMA4FO95754 770 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 ANXA2P07355 339 aaKnown RBP10.27□□□□□ -0.77
USP4-205ENST00000431357 RRASP10301 218 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 CTSEP14091 401 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 CFPP27918 469 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 GRPRP30550 384 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 PGDP52209 483 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 PSMA6P60900 246 aaKnown RBP10.27□□□□□ -0.77
USP4-205ENST00000431357 RASGEF1BQ0VAM2 473 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 MFSD13AQ14CX5 517 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 LINC00303Q3SY05 128 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 ARSKQ6UWY0 536 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 GLB1L2Q8IW92 636 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 C7orf61Q8IZ16 206 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SLC22A18ASQ8N1D0 253 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 GPR148Q8TDV2 347 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 TCTN2Q96GX1 697 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 OR2A7Q96R45 310 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 TCEAL2Q9H3H9 227 aaPredicted RBP10.27□□□□□ -0.77
USP4-205ENST00000431357 WDR76Q9H967 626 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 STEAP1Q9UHE8 339 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 KIF25Q9UIL4 384 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 LRP4O75096 1905 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms