RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 C12orf49Q9H741 205 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 SLC25A19Q9HC21 320 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 B3GAT2Q9NPZ5 323 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 NRIP3Q9NQ35 241 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 SMPD3Q9NY59 655 aaPredicted RBP9.77□□□□□ -0.85
CHD4-202ENST00000430771 REV1Q9UBZ9 1251 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 NKX1-2Q9UD57 310 aaPredicted RBP9.77□□□□□ -0.85
CHD4-202ENST00000430771 TMEFF2Q9UIK5 374 aaPredicted RBP9.77□□□□□ -0.85
CHD4-202ENST00000430771 ZNF462Q96JM2 2506 aa9.77□□□□□ -0.85
CHD4-202ENST00000430771 NCOA6Q14686 2063 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 TEX13CA0A0J9YWL9 993 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 J3QKU1 62 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ARPC3O15145 178 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 IDH3BO43837 385 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 MITFO75030 526 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 TNFSF13O75888 250 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 TXNDC12O95881 172 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 IFNGP01579 166 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 TP53P04637 393 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 CD8BP10966 210 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ZNF26P17031 533 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 ZNF3P17036 446 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 BMP5P22003 454 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 POU1F1P28069 291 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 GRK5P34947 590 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ACVR1BP36896 505 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 KIR2DL2P43627 348 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 OR3A2P47893 321 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 CSNK1A1P48729 337 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 SELENOPP49908 381 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 CRISP1P54107 249 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 CLRN1P58418 232 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ERVK-25P63136 954 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 FOXF2Q12947 444 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ITGADQ13349 1161 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 LRRC36Q1X8D7 754 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 SLC25A35Q3KQZ1 300 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ANKRD34AQ69YU3 496 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 VWA1Q6PCB0 445 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 TFAP2EQ6VUC0 442 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 NCCRP1Q6ZVX7 275 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 FAM122BQ7Z309 247 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ABHD12BQ7Z5M8 362 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 LNX2Q8N448 690 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 POMGNT2Q8NAT1 580 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 OR8D4Q8NGM9 314 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 FNDC8Q8TC99 324 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ZNF566Q969W8 418 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 LRRC46Q96FV0 321 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 SLC25A44Q96H78 314 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 ERMAPQ96PL5 475 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 ALG12Q9BV10 488 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 RASSF4Q9H2L5 321 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 SLCO5A1Q9H2Y9 848 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 IL20RAQ9UHF4 553 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ERRFI1Q9UJM3 462 aaPredicted RBP9.76□□□□□ -0.85
CHD4-202ENST00000430771 KLHL21Q9UJP4 597 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 RNF6Q9Y252 685 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 ADAM18Q9Y3Q7 739 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 NBASA2RRP1 2371 aa9.76□□□□□ -0.85
CHD4-202ENST00000430771 RP1L1Q8IWN7 2480 aaPredicted RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 RIIAD1A6NNX1 92 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 EEF1E1-BLOC1S5C9J1V9 151 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 BHLHE40O14503 412 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 MSTNO14793 375 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 EEF1E1O43324 174 aaKnown RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD4-202ENST00000430771 KRT33AO76009 404 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZNF432O94892 652 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 CNOT4O95628 575 aaKnown RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 AGAP20933 346 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 CD47Q08722 323 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 NPRL3Q12980 569 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 CAMK2DQ13557 499 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 MESTQ5EB52 335 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ARMC4Q5T2S8 1044 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 NUFIP2Q7Z417 695 aaKnown RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 CCDC71Q8IV32 467 aaPredicted RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 TMEM123Q8N131 208 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 GPR137CQ8N3F9 429 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZNF808Q8N4W9 903 aaPredicted RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 ARIH2OSQ8N7S6 290 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZIC4Q8N9L1 334 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 OR6N1Q8NGY5 312 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZNF519Q8TB69 540 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 PLEKHA8Q96JA3 519 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 Q96M85 177 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ALKBH3Q96Q83 286 aaPredicted RBP9.75□□□□□ -0.85
CHD4-202ENST00000430771 SLC38A2Q96QD8 506 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 OR2M2Q96R28 347 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 SNX18Q96RF0 628 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 SLC29A1Q99808 456 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 EMC6Q9BV81 110 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 LINC00470Q9BZP3 86 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 ASB6Q9NWX5 421 aa9.75□□□□□ -0.85
CHD4-202ENST00000430771 UPB1Q9UBR1 384 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms