RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 OAFQ86UD1 273 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 KIF18BQ86Y91 864 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 DMRTC2Q8IXT2 367 aaPredicted RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 C20orf196Q8IYI0 205 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 CDK20Q8IZL9 346 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 HS3ST5Q8IZT8 346 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 LINC00471Q8N535 108 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 OR6X1Q8NH79 312 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 NMD3Q96D46 503 aaKnown RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 BOD1Q96IK1 185 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 RAB3IPQ96QF0 476 aaPredicted RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 GPX7Q96SL4 187 aaPredicted RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 SPOCK3Q9BQ16 436 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 EMC6Q9BV81 110 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 LINC00470Q9BZP3 86 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 INIPQ9NRY2 104 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 C6orf203Q9P0P8 240 aaPredicted RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 TMCC3Q9ULS5 477 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 MAGED1Q9Y5V3 778 aaPredicted RBP10.95□□□□□ -0.66
USP40-205ENST00000430158 APCP25054 2843 aa10.95□□□□□ -0.66
USP40-205ENST00000430158 POLQO75417 2590 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 TACC2O95359 2948 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 MCIDASD6RGH6 385 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 RPL36A-HNRNPH2H7BZ11 118 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 HNRNPRO43390 633 aaKnown RBP10.94□□□□□ -0.66
USP40-205ENST00000430158 RNF13O43567 381 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 OR10H3O60404 316 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ENTPD5O75356 428 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 OR6A2O95222 327 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ADAP00813 363 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 SAGP10523 405 aaPredicted RBP10.94□□□□□ -0.66
USP40-205ENST00000430158 UGT2B10P36537 528 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 P2RY6Q15077 328 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 HIST3H3Q16695 136 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ALG10Q5BKT4 473 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 SFRP5Q5T4F7 317 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ANKRD34AQ69YU3 496 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 HIST2H2BCQ6DN03 193 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 NIPAL3Q6P499 406 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 FAM122BQ7Z309 247 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 CXorf67Q86X51 503 aaPredicted RBP10.94□□□□□ -0.66
USP40-205ENST00000430158 ZNF100Q8IYN0 542 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ZNF433Q8N7K0 673 aaPredicted RBP10.94□□□□□ -0.66
USP40-205ENST00000430158 POMGNT2Q8NAT1 580 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ZNF519Q8TB69 540 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 GIPC3Q8TF64 312 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 PYDC1Q8WXC3 89 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ASB10Q8WXI3 467 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 LRTOMTQ8WZ04 291 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 TMEM54Q969K7 222 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
USP40-205ENST00000430158 NRBF2Q96F24 287 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 LRR1Q96L50 414 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 TXNIPQ9H3M7 391 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 REV1Q9UBZ9 1251 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 FBN2P35556 2912 aa10.94□□□□□ -0.66
USP40-205ENST00000430158 OR6C65A6NJZ3 312 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 ANKRD65E5RJM6 399 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 C16orf97H3BN30 126 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 DEAF1O75398 565 aaPredicted RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 CD14P08571 375 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 PGA4P0DJD7 388 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 PGA3P0DJD8 388 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 POU2F1P14859 743 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 PRKACGP22612 351 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 IFNGR2P38484 337 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 ZNF133P52736 654 aaPredicted RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 BIDP55957 195 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 PRPS1P60891 318 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 ITGADQ13349 1161 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 SNTB1Q13884 538 aaKnown RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 TAF11Q15544 211 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 TSC22D1Q15714 1073 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 SHQ1Q6PI26 577 aaKnown RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 LRFN4Q6PJG9 635 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 SEZ6L2Q6UXD5 910 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 ZNF620Q6ZNG0 422 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 STK32CQ86UX6 486 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 IGFN1Q86VF2 1251 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 AQP11Q8NBQ7 271 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 OR10G2Q8NGC3 310 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 SLC25A44Q96H78 314 aaPredicted RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 ADAD1Q96M93 576 aaKnown RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 TSPAN32Q96QS1 320 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 FEVQ99581 238 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 NIPSNAP1Q9BPW8 284 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 NRIP3Q9NQ35 241 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 IL20Q9NYY1 176 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
USP40-205ENST00000430158 MGAT4BQ9UQ53 548 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 GPR52Q9Y2T5 361 aa10.93□□□□□ -0.66
USP40-205ENST00000430158 CENPBD1B2RD01 187 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 SLC43A1O75387 559 aa10.92□□□□□ -0.66
USP40-205ENST00000430158 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
USP40-205ENST00000430158 SERPINI2O75830 405 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms