RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 GNB2P62879 340 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 IL1AP01583 271 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 GABRA5P31644 462 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 RAD52P43351 418 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 GABRA4P48169 554 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 TESK1Q15569 626 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SLC35G3Q8N808 338 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 OR56B4Q8NH76 319 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 GHSRQ92847 366 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF75AQ96N20 296 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 TXNL1O43396 289 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 FOSL1P15407 271 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 M6PRP20645 277 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ARHGAP11BQ3KRB8 267 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 CNTN4Q8IWV2 1026 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ADGRF3Q8IZF5 1079 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF582Q96NG8 517 aaPredicted RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 ZMAT3Q9HA38 289 aaKnown RBP14.22□□□□□ -0.13
PTPRF-206ENST00000429895 SMCO4Q9NRQ5 59 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 HS3ST2Q9Y278 367 aa14.22□□□□□ -0.13
PTPRF-206ENST00000429895 RICTORQ6R327 1708 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 YKT6O15498 198 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 SHC1P29353 583 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 DLX5P56178 289 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 RACK1P63244 317 aaKnown RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 PHLDA2Q53GA4 152 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 CPEB2Q7Z5Q1 589 aaKnown RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 NAA40Q86UY6 237 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 TMEM106AQ96A25 262 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 APH1AQ96BI3 265 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 ZNF436Q9C0F3 470 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 SHARPINQ9H0F6 387 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 GLIPR2Q9H4G4 154 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 B3GAT1Q9P2W7 334 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 OR6C65A6NJZ3 312 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 M0QYG6 137 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 SPINT2O43291 252 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 SELENOFO60613 162 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 EIF1BO60739 113 aaKnown RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 SCGB1D1O95968 90 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 NME2P22392 152 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 PRPH2P23942 346 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 TPMTP51580 245 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 BCL7AQ4VC05 210 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 ACTBL2Q562R1 376 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 CPPED1Q9BRF8 314 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-206ENST00000429895 NRIP3Q9NQ35 241 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 IL37Q9NZH6 218 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 ATP23Q9Y6H3 246 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 LINC01553A4QN01 128 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 E9PI62 339 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 TGM6O95932 706 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 FURINP09958 794 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 OR8U8P0C7N1 319 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 CALCBP10092 127 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 DAPP51397 102 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 DCXRQ7Z4W1 244 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 LINC01599Q8WXQ3 324 aa14.21□□□□□ -0.13
PTPRF-206ENST00000429895 A0A1B0GX78 115 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 TMEM221A6NGB7 291 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 OLFM2O95897 454 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 RPS27AP62979 156 aaKnown RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 UBA52P62987 128 aaKnown RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 SLC22A25Q6T423 547 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 PGAP1Q75T13 922 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 PDLIM5Q96HC4 596 aaKnown RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 ABHD6Q9BV23 337 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 MS4A8Q9BY19 250 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 TXLNGYQ9BZA5 131 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 METTL17Q9H7H0 456 aaPredicted RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 WASH6PQ9NQA3 447 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 THAP10Q9P2Z0 257 aaPredicted RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 BTBD17A6NE02 478 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 F11P03951 625 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 HLA-DOBP13765 273 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 SLCO4C1Q6ZQN7 724 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 FAM71CQ8NEG0 241 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 KCNJ15Q99712 375 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 C6orf106Q9H6K1 298 aaPredicted RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 MBNL1Q9NR56 388 aaKnown RBP14.21□□□□□ -0.14
PTPRF-206ENST00000429895 SLC39A9Q9NUM3 307 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 UFSP2Q9NUQ7 469 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 MARCH5Q9NX47 278 aa14.21□□□□□ -0.14
PTPRF-206ENST00000429895 MYH8P13535 1937 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 CTDSP2O14595 271 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 DEGS1O15121 323 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 FOXK2Q01167 660 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 TLE1Q04724 770 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 PAQR9Q6ZVX9 377 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 GDF7Q7Z4P5 450 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 ZNF511Q8NB15 262 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 AGAP14A8MT82 685 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 H0Y8X5 98 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 F2RP25116 425 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 CD27P26842 260 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 SLC7A5P1Q8MH63 180 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 PLPP7Q8NBV4 271 aa14.2□□□□□ -0.14
PTPRF-206ENST00000429895 NXPE3Q969Y0 559 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms