RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 DPH2Q9BQC3 489 aaPredicted RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 NRSN2Q9GZP1 204 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 PIGMQ9H3S5 423 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 SLAMF7Q9NQ25 335 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 EXOSC3Q9NQT5 275 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 LANCL2Q9NS86 450 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 MIOXQ9UGB7 285 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ACSL6Q9UKU0 697 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 PADI1Q9ULC6 663 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 DMRT1Q9Y5R6 373 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 FREM2Q5SZK8 3169 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 TRAPPC13A5PLN9 417 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 NAP1L6A6NFF2 107 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 SNRPGP15A8MWD9 76 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 CLDN4O14493 209 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 PHYHO14832 338 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 KDM4BO94953 1096 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 SERPINA3P01011 423 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 IFNGR1P15260 489 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 TCN2P20062 427 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 POU3F2P20265 443 aaPredicted RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 PTAFRP25105 342 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 MECP2P51608 486 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 EFNA3P52797 238 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 GAS1P54826 345 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 RPS18P62269 152 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 EEF1A1P68104 462 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 EEF1A2Q05639 463 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 DUSP2Q05923 314 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 TRAM2Q15035 370 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 EEF1A1P5Q5VTE0 462 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ZNF660Q6AZW8 331 aaPredicted RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 OR7E24Q6IFN5 339 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ALKAL2Q6UX46 152 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 KRT77Q7Z794 578 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ZNF595Q8IYB9 648 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 OR6V1Q8N148 313 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 GNPDA2Q8TDQ7 276 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 EDARADDQ8WWZ3 215 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ELP4Q96EB1 424 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 CNRIP1Q96F85 164 aaPredicted RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 UTP23Q9BRU9 249 aaKnown RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 SPRY4Q9C004 299 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 CDCP1Q9H5V8 836 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 TPT1P8Q9HAU6 139 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 BARX1Q9HBU1 254 aaPredicted RBP10.41□□□□□ -0.74
CECR3-201ENST00000428828 ZFP57Q9NU63 452 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 DNAJC27Q9NZQ0 273 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 MGAT4CQ9UBM8 478 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 CES1P1Q9UKY3 287 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ZNF780BQ9Y6R6 833 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 ENPP4Q9Y6X5 453 aa10.41□□□□□ -0.74
CECR3-201ENST00000428828 A0A1B0GWJ7 208 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 TO15178 435 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 EEF1E1O43324 174 aaKnown RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 FZD7O75084 574 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 CLN5O75503 358 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 GCM2O75603 506 aaPredicted RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 UBL3O95164 117 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 GADD45GO95257 159 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 GASTP01350 101 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 IL5P05113 134 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 HEXBP07686 556 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 SPP1P10451 314 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 PAICSP22234 425 aaKnown RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 PPP2R1BP30154 601 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 NTSP30990 170 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 CHI3L1P36222 383 aaPredicted RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 DLSTP36957 453 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 EIF2S3P41091 472 aaKnown RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 XKP51811 444 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 PGDP52209 483 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 NCBP2P52298 156 aaKnown RBP eCLIP10.4□□□□□ -0.74
CECR3-201ENST00000428828 CAV3P56539 151 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 WNT3P56703 355 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 HSPB3Q12988 150 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 TGIF1Q15583 401 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 SPDYE7PQ495Y7 208 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 PAQR6Q6TCH4 344 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 MOB3CQ70IA8 216 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 CLECL1Q8IZS7 167 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 IL22RA1Q8N6P7 574 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 ZNF527Q8NB42 609 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 BPIFCQ8NFQ6 507 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 OR4K14Q8NGD5 310 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 FGF11Q92914 225 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 ANKRD9Q96BM1 317 aaPredicted RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 IL4I1Q96RQ9 567 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 SPSB2Q99619 263 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 VN1R1Q9GZP7 353 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 ENKD1Q9H0I2 346 aa10.4□□□□□ -0.74
CECR3-201ENST00000428828 NMNAT1Q9HAN9 279 aaPredicted RBP10.4□□□□□ -0.74
CECR3-201ENST00000428828 C14orf105Q9NVL8 296 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms