RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 LINC00471Q8N535 108 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 GIPC3Q8TF64 312 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 PYDC1Q8WXC3 89 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 POLDIP3Q9BY77 421 aaKnown RBP12.84□□□□□ -0.35
SGCE-204ENST00000428696 TAS2R16Q9NYV7 291 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 PDP1Q9P0J1 537 aaPredicted RBP12.84□□□□□ -0.35
SGCE-204ENST00000428696 GRHPRQ9UBQ7 328 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 CACNA1CQ13936 2221 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 A0A1W2PR80 420 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 FZD7O75084 574 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 DEAF1O75398 565 aaPredicted RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 NDUFB2O95178 105 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 PRKACGP22612 351 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 FASP25445 335 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 MPGP29372 298 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 ACVR1BP36896 505 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 PEX19P40855 299 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 LIMS1P48059 325 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 MYBPC1Q00872 1141 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 WDFY1Q8IWB7 410 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 ZNF433Q8N7K0 673 aaPredicted RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 PAPD5Q8NDF8 572 aaKnown RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 OR6X1Q8NH79 312 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 FANK1Q8TC84 345 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 SAMD8Q96LT4 415 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 ADAD1Q96M93 576 aaKnown RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 ULBP2Q9BZM5 246 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 SLC24A3Q9HC58 644 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
SGCE-204ENST00000428696 SIGLEC7Q9Y286 467 aa12.83□□□□□ -0.36
SGCE-204ENST00000428696 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 A0A096LPE4 126 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 A0A1W2PPZ6 126 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 SEC14L2O76054 403 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ZNF432O94892 652 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 IGHG1P01857 330 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 EPXP11678 715 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 PSMB1P20618 241 aaKnown RBP12.82□□□□□ -0.36
SGCE-204ENST00000428696 FPR3P25089 353 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 HOXC12P31275 282 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ACTR3P61158 418 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 RPL27P61353 136 aaKnown RBP12.82□□□□□ -0.36
SGCE-204ENST00000428696 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 CD47Q08722 323 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 TSPAN31Q12999 210 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 CEACAM16Q2WEN9 425 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ANKDD1AQ495B1 522 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 CLEC12AQ5QGZ9 265 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 SMARCD3Q6STE5 483 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 LINGO2Q7L985 606 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 TMEM179BQ7Z7N9 219 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 C20orf196Q8IYI0 205 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 C10orf67Q8IYJ2 551 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 HS3ST5Q8IZT8 346 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 TMEM123Q8N131 208 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ATG16L2Q8NAA4 619 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 OR52N5Q8NH56 324 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 FAM222BQ8WU58 562 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 LRTOMTQ8WZ04 291 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 SLC25A44Q96H78 314 aaPredicted RBP12.82□□□□□ -0.36
SGCE-204ENST00000428696 FEVQ99581 238 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 C1QTNF6Q9BXI9 259 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 SEMA6AQ9H2E6 1030 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 TXNIPQ9H3M7 391 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 RERGLQ9H628 205 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ZNF556Q9HAH1 456 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 GPR35Q9HC97 309 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ZNF226Q9NYT6 803 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 POFUT2Q9Y2G5 429 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 ADAM18Q9Y3Q7 739 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 IER3IP1Q9Y5U9 82 aa12.82□□□□□ -0.36
SGCE-204ENST00000428696 PTP4A3O75365 173 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 TRMUO75648 421 aaKnown RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 PPP1R3DO95685 299 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 ITGA5P08648 1049 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 QDPRP09417 244 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 ACADSP16219 412 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 NOS3P29474 1203 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 CCKARP32238 428 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 ARF1P84077 181 aaKnown RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 NHLRC1Q6VVB1 395 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 HDDC2Q7Z4H3 204 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 ASB10Q8WXI3 467 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 ZNF837Q96EG3 531 aaPredicted RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 Q96M85 177 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms