RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CD79AP11912 226 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 APEHP13798 732 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 CALCRP30988 508 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 PCGF2P35227 344 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 EVX1P49640 407 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 MTPNP58546 118 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 SNTB2Q13425 540 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 CYLC2Q14093 348 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 GGTLC2Q14390 218 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 IQCCQ4KMZ1 466 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 CARD17Q5XLA6 110 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 REP15Q6BDI9 236 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 FAM166AQ6J272 317 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 HDDC2Q7Z4H3 204 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 SPATA21Q7Z572 469 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 DPPA2Q7Z7J5 298 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 COMTD1Q86VU5 262 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 PTOV1Q86YD1 416 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 TMEM158Q8WZ71 300 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 FOXB1Q99853 325 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 KAT8Q9H7Z6 458 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 NANSQ9NR45 359 aa13.41□□□□□ -0.26
CTDSP1-202ENST00000428361 A0A0G2JND7 137 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 VWC2LB2RUY7 222 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 M0R3H8 397 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 LMX1BO60663 402 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 FARS2O95363 451 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 IFNA14P01570 189 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 CD247P20963 164 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 THBS4P35443 961 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 GALK2Q01415 458 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 MAPRE2Q15555 327 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 ENTPD8Q5MY95 495 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 PIWIL3Q7Z3Z3 882 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 OR6T1Q8NGN1 323 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 OR6X1Q8NH79 312 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 ADAMTS16Q8TE57 1224 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 MOGAT1Q96PD6 335 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 EMC6Q9BV81 110 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 POLR2J2Q9GZM3 115 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 POLR2J3Q9H1A7 115 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 NOX3Q9HBY0 568 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 NPHS2Q9NP85 383 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 MED29Q9NX70 200 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 ZNF229Q9UJW7 825 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 RTTNQ86VV8 2226 aa13.4□□□□□ -0.26
CTDSP1-202ENST00000428361 COL6A5A8TX70 2615 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 RNF13O43567 381 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 MGRN1O60291 552 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 TPST2O60704 377 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 SERPINI2O75830 405 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 LY6HO94772 140 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 HPRP00739 348 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 NPPAP01160 153 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 OPN1SWP03999 348 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.275e-6■□□□□ 9.7
CTDSP1-202ENST00000428361 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZNF16P17020 682 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 NR4A1P22736 598 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 THBS2P35442 1172 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 HGFACQ04756 655 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZP4Q12836 540 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 NPTX1Q15818 432 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZNF74Q16587 644 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 DUSP7Q16829 419 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 VMACQ2NL98 169 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 COQ5Q5HYK3 327 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 GKAP1Q5VSY0 366 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 LINC00114Q6XXX2 140 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 LSRQ86X29 649 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 OR10A6Q8NH74 314 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZNF566Q969W8 418 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 PCDHAC1Q9H158 963 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 C1orf198Q9H425 327 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ZNF385DQ9H6B1 395 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 B3GNT2Q9NY97 397 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 STX18Q9P2W9 335 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 BAG5Q9UL15 447 aa13.39□□□□□ -0.27
CTDSP1-202ENST00000428361 ANK3Q12955 4377 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 LOC100289279A0A1B0GTE1 492 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 SLC22A23A1A5C7 686 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 BBIP1A8MTZ0 92 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 C11orf98E9PRG8 122 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 SEC14L2O76054 403 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 PTHP01270 115 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 HLA-HP01893 362 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 CELA3BP08861 270 aa13.38□□□□□ -0.27
CTDSP1-202ENST00000428361 UMPSP11172 480 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms