RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 BSPH1Q075Z2 132 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 TRAM2Q15035 370 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 NIPAL3Q6P499 406 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 WDR88Q6ZMY6 472 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 TMPRSS11FQ6ZWK6 438 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 HIST3H2AQ7L7L0 130 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 SLC46A3Q7Z3Q1 461 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 CYP4Z1Q86W10 505 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 WFDC8Q8IUA0 241 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 C1orf174Q8IYL3 243 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 GPR137CQ8N3F9 429 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 POU5F2Q8N7G0 328 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 OR4F15Q8NGB8 312 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 TMEM171Q8WVE6 324 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 NANOS1Q8WY41 292 aaKnown RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 HIST1H2ACQ93077 130 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 SLC25A36Q96CQ1 311 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 MOGAT1Q96PD6 335 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 CCT8L2Q96SF2 557 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 KCTD14Q9BQ13 255 aaPredicted RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 MRPL13Q9BYD1 178 aaKnown RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 NDEL1Q9GZM8 345 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 C1orf198Q9H425 327 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 BARX1Q9HBU1 254 aaPredicted RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 ENPP4Q9Y6X5 453 aa8□□□□□ -1.13
SMC1A-203ENST00000428014 TEP1Q99973 2627 aaKnown RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 MAP1AP78559 2803 aaPredicted RBP8□□□□□ -1.13
SMC1A-203ENST00000428014 AKAP9Q99996 3911 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 USF3Q68DE3 2245 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ACANP16112 2415 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 SLC35F4A4IF30 521 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF726A6NNF4 738 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 SHISA9B4DS77 424 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 H7C417 338 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 GSTA4O15217 222 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 SMPD2O60906 423 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 RAD51DO75771 328 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 OR7A10O76100 309 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ADORA3P0DMS8 318 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 APEHP13798 732 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 CALB2P22676 271 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 CLDN17P56750 224 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 UBE2NP61088 152 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ROR2Q01974 943 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 PRKCDQ05655 676 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 TBRG1Q3YBR2 411 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 LRRC23Q53EV4 343 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 C10orf128Q5T292 105 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 AGAP6Q5VW22 663 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ANKRD34AQ69YU3 496 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 NANOGNBQ7Z5D8 188 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 TSPYL5Q86VY4 417 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 RBM45Q8IUH3 476 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 LINC00471Q8N535 108 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 NUP37Q8NFH4 326 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 LILRB1Q8NHL6 650 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 TMEM54Q969K7 222 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 SGTBQ96EQ0 304 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 TRMT61AQ96FX7 289 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ZC3HAV1LQ96H79 300 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 C7orf34Q96L11 122 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 GPX7Q96SL4 187 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 CCL19Q99731 98 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 DHRS9Q9BPW9 319 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ALG12Q9BV10 488 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 NELFAQ9H3P2 528 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF442Q9H7R0 627 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 GPR35Q9HC97 309 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 KRCC1Q9NPI7 259 aaPredicted RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 DLL4Q9NR61 685 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 MAN2C1Q9NTJ4 1040 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 NPAP1Q9NZP6 1156 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 PRPF19Q9UMS4 504 aaKnown RBP7.99□□□□□ -1.13
SMC1A-203ENST00000428014 USP22Q9UPT9 525 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 PLEKHA6Q9Y2H5 1048 aa7.99□□□□□ -1.13
SMC1A-203ENST00000428014 A0A1W2PRG6 482 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 VSTM5A8MXK1 200 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ABCD4O14678 606 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 UPK3AO75631 287 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 KRT36O76013 467 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CH25HO95992 272 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 BCL10O95999 233 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 HPRP00739 348 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 IGHG1P01857 330 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CRYAAP02489 173 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 SEMG1P04279 462 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 PGA4P0DJD7 388 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 PGA3P0DJD8 388 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 FUT1P19526 365 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 NPR2P20594 1047 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CSNK1A1P48729 337 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 EVX1P49640 407 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 HMGA2P52926 109 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ADAM8P78325 824 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 PIN1Q13526 163 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 EFNB3Q15768 340 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 IQCCQ4KMZ1 466 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 GLYATQ6IB77 296 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 MBOAT2Q6ZWT7 520 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 SLC35D2Q76EJ3 337 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms