RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 OR7E24Q6IFN5 339 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 CNEP1R1Q8N9A8 125 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 DTD2Q96FN9 168 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 LYRM2Q9NU23 88 aaPredicted RBP13.4□□□□□ -0.26
PTPN13-203ENST00000427191 GOLT1BQ9Y3E0 138 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 GABRR3A8MPY1 467 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 C1orf105O95561 183 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 CALCBP10092 127 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 RAB33AQ14088 237 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 H2BFWTQ7Z2G1 175 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 OR13C8Q8NGS7 320 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 OR5K2Q8NHB8 316 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 TSLPQ969D9 159 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 SELENOIQ9C0D9 397 aa13.4□□□□□ -0.26
PTPN13-203ENST00000427191 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 ATP1B1P05026 303 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.27
PTPN13-203ENST00000427191 NDUFA6P56556 154 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 MS4A2Q01362 244 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 RNF212Q495C1 297 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 TIGD3Q6B0B8 471 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 A4GALTQ9NPC4 353 aa13.4□□□□□ -0.27
PTPN13-203ENST00000427191 SDK1Q7Z5N4 2213 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TRBV11-1A0A0K0K1C0 115 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 CYTIPO60759 359 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TCRBP04435 133 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 GLAP06280 429 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 MRPL2Q5T653 305 aaKnown RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 HRASLS5Q96KN8 279 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 OMGP23515 440 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 RFC3P40938 356 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 RAB38P57729 211 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TNFRSF17Q02223 184 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 IL20RBQ6UXL0 311 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 HMGN2P46Q86SG4 172 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM106AQ96A25 262 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 RIMS4Q9H426 269 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 HEYLQ9NQ87 328 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 PRAMEF4O60810 478 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 ARSDP51689 593 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 KCNJ10P78508 379 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 CCL14Q16627 93 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TBC1D28Q2M2D7 210 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 NAXDQ8IW45 347 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM18Q96B42 140 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 C14orf79Q96F83 325 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 C6orf132Q5T0Z8 1188 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 NLGN4XQ8N0W4 816 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 STT3BQ8TCJ2 826 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 ADOQ96SZ5 270 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 LGALS4P56470 323 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 MFAP5Q13361 173 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 IAH1Q2TAA2 248 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 ARSGQ96EG1 525 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 APOOQ9BUR5 198 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 PSORS1C1Q9UIG5 152 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 SGK494L7N484 410 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 NXPH2O95156 264 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 PDGFAP04085 211 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 BLVRBP30043 206 aaPredicted RBP13.39□□□□□ -0.27
PTPN13-203ENST00000427191 CCR9P51686 369 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF85Q03923 595 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 RNF151Q2KHN1 245 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 NRARPQ7Z6K4 114 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 SPHK1Q9NYA1 384 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 GAB2Q9UQC2 676 aa13.39□□□□□ -0.27
PTPN13-203ENST00000427191 PAPLNO95428 1278 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ABOP16442 354 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SRMP19623 302 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SSR4P51571 173 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF485Q8NCK3 441 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 GJC3Q8NFK1 279 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR5AR1Q8NGP9 310 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 PKMYT1Q99640 499 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 PTRH2Q9Y3E5 179 aaKnown RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 NUP98P52948 1817 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 M0QZQ0 153 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 LY86O95711 162 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 PGBD5Q8N414 524 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR4F15Q8NGB8 312 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 OR5M8Q8NGP6 311 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 LIN7CQ9NUP9 197 aaKnown RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 PIAS3Q9Y6X2 628 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 PIK3C2AO00443 1686 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 H7BYZ3 331 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 GM2AP17900 193 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SEH1LQ96EE3 360 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 KDM4EB2RXH2 506 aaPredicted RBP13.38□□□□□ -0.27
PTPN13-203ENST00000427191 H0YIV9 168 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 FBP1P09467 338 aa13.38□□□□□ -0.27
PTPN13-203ENST00000427191 CPN1P15169 458 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms