RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 RPS14P62263 151 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CDK16Q00536 496 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TNFRSF17Q02223 184 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CKAP4Q07065 602 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 UNC119Q13432 240 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 OR5I1Q13606 314 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ZMYND11Q15326 602 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NRF1Q16656 503 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CARD16Q5EG05 197 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 C1orf220Q5T0J3 134 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CENPPQ6IPU0 288 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 C6orf89Q6UWU4 347 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 IL34Q6ZMJ4 242 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 EFL1Q7Z2Z2 1120 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF546Q86UE3 836 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ECHDC2Q86YB7 292 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF679Q8IYX0 411 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 LRRC75A-AS1Q8N1F1 130 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 C6orf223Q8N319 242 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 PNKDQ8N490 385 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 FAM71E2Q8N5Q1 922 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 EIF1ADQ8N9N8 165 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 LINC01555Q8NAE3 123 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SUMF2Q8NBJ7 301 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 OR10G3Q8NGC4 313 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 OR6C4Q8NGE1 309 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SCFD1Q8WVM8 642 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ARPC1AQ92747 370 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 COQ2Q96H96 371 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 LINC00167Q96N53 147 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 PSKH2Q96QS6 385 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RIOK1Q9BRS2 568 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 GON7Q9BXV9 100 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 HES7Q9BYE0 225 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 PARD6BQ9BYG5 372 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 GCOM2Q9BZD3 368 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 LRRC40Q9H9A6 602 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SIAEQ9HAT2 523 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NUFIP1Q9UHK0 495 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 PRO0461Q9UI25 63 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF225Q9UK10 706 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 MMP17Q9ULZ9 603 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NEU3Q9UQ49 428 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 KCNIP3Q9Y2W7 256 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SLC25A15Q9Y619 301 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RTL1A6NKG5 1358 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NWD1Q149M9 1564 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 MED1Q15648 1581 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CEP170BQ9Y4F5 1589 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SCN11AQ9UI33 1791 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CRB1P82279 1406 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NCOA3Q9Y6Q9 1424 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 KIF1AQ12756 1690 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ALS2Q96Q42 1657 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PXDNLA1KZ92 1463 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SBNO1A3KN83 1393 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ARHGEF10O15013 1369 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PLEKHG2Q9H7P9 1386 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 WI2-2373I1.2A0A1W2PRP0 233 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PSMB11A5LHX3 300 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PINLYPA6NC86 204 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 A6NDX4 124 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 BTBD17A6NE02 478 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SNTNA6NMZ2 147 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 TRAF3IP2O43734 574 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PRKAB2O43741 272 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CLDN9O95484 217 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 IGHV4-34P06331 123 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NR2C1P13056 603 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ICAM2P13598 275 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF17P17021 662 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SLC2A5P22732 501 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CMA1P23946 247 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 DEKP35659 375 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 SLC26A3P40879 764 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 EPS15P42566 896 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 HMGN5P82970 282 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 DAZ2Q13117 558 aaKnown RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 VGLL4Q14135 290 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CYTH1Q15438 398 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 MAJINQ3KP22 176 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 FILIP1LQ4L180 1135 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 GPR157Q5UAW9 335 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF530Q6P9A1 599 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 KDELC1Q6UW63 502 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 UQCC3Q6UW78 93 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 ENPP6Q6UWR7 440 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 TIFABQ6ZNK6 161 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 Q6ZVH6 145 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 DHDDSQ86SQ9 333 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PAQR7Q86WK9 346 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NBPF5PQ86XG9 351 aaPredicted RBP1.65□□□□□ -2.15
PTPRC-208ENST00000427110 PLA2G4DQ86XP0 818 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 TGIF2LXQ8IUE1 241 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NUDCD3Q8IVD9 361 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 MKXQ8IYA7 352 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 FAM133AQ8N9E0 248 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 NKAPP1Q8N9T2 125 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 Q8N9W7 124 aa1.65□□□□□ -2.15
PTPRC-208ENST00000427110 CCDC54Q8NEL0 328 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms