RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 CAMK2DQ13557 499 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 FAM69AQ5T7M9 428 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 RNF220Q5VTB9 566 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 ZNF771Q7L3S4 317 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-202ENST00000426447 NET1Q7Z628 596 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-202ENST00000426447 NUDCD3Q8IVD9 361 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 RAB1CQ92928 201 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 SLC38A4Q969I6 547 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 TAAR8Q969N4 342 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 LRR1Q96L50 414 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 C1QTNF5Q9BXJ0 243 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 WIPI2Q9Y4P8 454 aa12.51□□□□□ -0.41
PDAP1-202ENST00000426447 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 TMEM247A6NEH6 219 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 CLDN25C9JDP6 229 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 DEAF1O75398 565 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-202ENST00000426447 CLPTM1O96005 669 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 IGHV2-5P01817 119 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 LCKP06239 509 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 MYZAPP0CAP1 466 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 FAM157BP0CG42 384 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 LBPP18428 481 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 PRTN3P24158 256 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-202ENST00000426447 LRRC74AQ0VAA2 488 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 MAPK11Q15759 364 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 HFEQ30201 348 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 C5orf46Q6UWT4 87 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 MIER2Q8N344 545 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 ZNF781Q8N8C0 355 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 FOXB1Q99853 325 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 OR51B6Q9H340 312 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 IFT52Q9Y366 437 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
PDAP1-202ENST00000426447 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 A0A0G2JPF8 293 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 HNRNPCL3B7ZW38 293 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 TRAF3IP2O43734 574 aaPredicted RBP12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ITM2AO43736 263 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 HNRNPCL1O60812 293 aaKnown RBP12.49□□□□□ -0.41
PDAP1-202ENST00000426447 MT-ND5P03915 603 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 SERPINA5P05154 406 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 PATE4P0C8F1 98 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 HNRNPCL4P0DMR1 293 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 HLA-DOBP13765 273 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ETFAP13804 333 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
PDAP1-202ENST00000426447 UFM1P61960 85 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 LCN2P80188 198 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 RBBP4Q09028 425 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 BAMBIQ13145 260 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 MOGQ16653 247 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 TSTQ16762 297 aaKnown RBP12.49□□□□□ -0.41
PDAP1-202ENST00000426447 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
PDAP1-202ENST00000426447 USP51Q70EK9 711 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ZNF627Q7L945 461 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ICA1LQ8NDH6 482 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 SLC38A5Q8WUX1 472 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 TXNDC15Q96J42 360 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 TEX37Q96LM6 180 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 TSPAN32Q96QS1 320 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 GPA33Q99795 319 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 MED29Q9NX70 200 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 NKIRAS2Q9NYR9 191 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ZNF224Q9NZL3 707 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 OPN4Q9UHM6 478 aa12.49□□□□□ -0.41
PDAP1-202ENST00000426447 ISPDA4D126 451 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 WDR91A4D1P6 747 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 RFXANKO14593 260 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 ANP32DO95626 131 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 DRD4P21917 467 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 RPL14P50914 215 aaKnown RBP12.48□□□□□ -0.41
PDAP1-202ENST00000426447 DSTNP60981 165 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 IL13RA1P78552 427 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 PIWIL3Q7Z3Z3 882 aaKnown RBP12.48□□□□□ -0.41
PDAP1-202ENST00000426447 WDFY1Q8IWB7 410 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 SLC30A7Q8NEW0 376 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 CCL17Q92583 94 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 DVL3Q92997 716 aaPredicted RBP12.48□□□□□ -0.41
PDAP1-202ENST00000426447 ZBTB18Q99592 522 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 NUF2Q9BZD4 464 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 RNF121Q9H920 327 aa12.48□□□□□ -0.41
PDAP1-202ENST00000426447 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
PDAP1-202ENST00000426447 SAP30LQ9HAJ7 183 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms