RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TNFRSF1BP20333 461 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 TTKP33981 857 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 CAPZA2P47755 286 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 CRYBA2P53672 197 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 ARF1P84077 181 aaKnown RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 MS4A18Q3C1V0 323 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 WDR88Q6ZMY6 472 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 ARPINQ7Z6K5 226 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 TMEM123Q8N131 208 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 OR6N1Q8NGY5 312 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 RP9Q8TA86 221 aaKnown RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 ADAD1Q96M93 576 aaKnown RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 ZNF583Q96ND8 569 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 SLC38A2Q96QD8 506 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 CACNG6Q9BXT2 260 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 BARX1Q9HBU1 254 aaPredicted RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 GPR35Q9HC97 309 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 MOV10Q9HCE1 1003 aaKnown RBP11.08□□□□□ -0.64
SGCE-203ENST00000425444 NANSQ9NR45 359 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 CBLN4Q9NTU7 201 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 MOKQ9UQ07 419 aa11.08□□□□□ -0.64
SGCE-203ENST00000425444 ARPC4-TTLL3A0A0A6YYG9 625 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 IGHV1-18A0A0C4DH31 117 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ELOVL7A1L3X0 281 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 SLC35F4A4IF30 521 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 RPL36A-HNRNPH2H7BZ11 118 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 PLPP3O14495 311 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ATP8B1O43520 1251 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 RNF13O43567 381 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 SHOX2O60902 331 aaPredicted RBP11.07□□□□□ -0.64
SGCE-203ENST00000425444 SEC14L2O76054 403 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 CD8AP01732 235 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 IGHV4-39P01824 125 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 CRYAAP02489 173 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 THY1P04216 161 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 HIST1H2ABP04908 130 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 COX4I1P13073 169 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 PAX7P23759 505 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 CAMK2DQ13557 499 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ZNF74Q16587 644 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 CYBRD1Q53TN4 286 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ZNF544Q6NX49 715 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 LINC00114Q6XXX2 140 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 DNM1P46Q6ZS02 220 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 IL17RELQ6ZVW7 336 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 HIST3H2AQ7L7L0 130 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 NANOGNBQ7Z5D8 188 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 PXKQ7Z7A4 578 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 TSPYL5Q86VY4 417 aaPredicted RBP11.07□□□□□ -0.64
SGCE-203ENST00000425444 MICU2Q8IYU8 434 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 MAGEE2Q8TD90 523 aaPredicted RBP11.07□□□□□ -0.64
SGCE-203ENST00000425444 HIST1H2ACQ93077 130 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 BOD1Q96IK1 185 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 TXNDC15Q96J42 360 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 TPD52L3Q96J77 140 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 RHNO1Q9BSD3 238 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ULBP2Q9BZM5 246 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 FAM107BQ9H098 131 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 NSRP1Q9H0G5 558 aaKnown RBP11.07□□□□□ -0.64
SGCE-203ENST00000425444 PCDHAC1Q9H158 963 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 NELFAQ9H3P2 528 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 GDF2Q9UK05 429 aaPredicted RBP11.07□□□□□ -0.64
SGCE-203ENST00000425444 AP3M1Q9Y2T2 418 aa11.07□□□□□ -0.64
SGCE-203ENST00000425444 ZNF99A8MXY4 864 aaPredicted RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 GSTA4O15217 222 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 NDUFS7O75251 213 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 OR5F1O95221 314 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 LYPD3O95274 346 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 BMP4P12644 408 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 IFNGR1P15260 489 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 KDELR2P33947 212 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 OR1E2P47887 323 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 CSNK1A1P48729 337 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 NUDT6P53370 316 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 SPATA21Q7Z572 469 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 C20orf196Q8IYI0 205 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 ZNF837Q96EG3 531 aaPredicted RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 TNFRSF13CQ96RJ3 184 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 KATNB1Q9BVA0 655 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 POLR2J2Q9GZM3 115 aaKnown RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 POLR2J3Q9H1A7 115 aaKnown RBP11.06□□□□□ -0.64
SGCE-203ENST00000425444 ZNF229Q9UJW7 825 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 POFUT2Q9Y2G5 429 aa11.06□□□□□ -0.64
SGCE-203ENST00000425444 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
SGCE-203ENST00000425444 SSX4O60224 188 aa11.05□□□□□ -0.64
SGCE-203ENST00000425444 CECR9P0C854 216 aa11.05□□□□□ -0.64
SGCE-203ENST00000425444 EGR1P18146 543 aa11.05□□□□□ -0.64
SGCE-203ENST00000425444 APOBEC3AP31941 199 aaPredicted RBP11.05□□□□□ -0.64
SGCE-203ENST00000425444 IFNA8P32881 189 aa11.05□□□□□ -0.64
SGCE-203ENST00000425444 RBM34P42696 430 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms