RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PGCP20142 388 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 ACKR1Q16570 336 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 BCL2L15Q5TBC7 163 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 LRRN1Q6UXK5 716 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 COX15Q7KZN9 410 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 BMPERQ8N8U9 685 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 LILRB4Q8NHJ6 448 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 DNASE2BQ8WZ79 361 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 ADAM19Q9H013 955 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 AUNIPQ9H7T9 357 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 APMAPQ9HDC9 416 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 EXOSC3Q9NQT5 275 aaKnown RBP10.47□□□□□ -0.73
UBR4-207ENST00000425413 WNT16Q9UBV4 365 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SIT1Q9Y3P8 196 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 EML5Q05BV3 1969 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 RGS13O14921 159 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SLC16A7O60669 478 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 RENP00797 406 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 MAS1P04201 325 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 HEXBP07686 556 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 YES1P07947 543 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 HLA-DOBP13765 273 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 CD53P19397 219 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
UBR4-207ENST00000425413 RNF4P78317 190 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 GPLD1P80108 840 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 COL28A1Q2UY09 1125 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SLC35D3Q5M8T2 416 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 PWWP2BQ6NUJ5 590 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SLC16A9Q7RTY1 509 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 TIGD4Q8IY51 512 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 SLC43A2Q8N370 569 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 OR2T4Q8NH00 348 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 NSMAFQ92636 917 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 GPX7Q96SL4 187 aaPredicted RBP10.47□□□□□ -0.73
UBR4-207ENST00000425413 GFI1Q99684 422 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 KCNJ15Q99712 375 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 NUDT15Q9NV35 164 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 NKIRAS2Q9NYR9 191 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 MED11Q9P086 117 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 FRRS1LQ9P0K9 344 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 ZNF281Q9Y2X9 895 aa10.47□□□□□ -0.73
UBR4-207ENST00000425413 ZNF879B4DU55 563 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 OR6A2O95222 327 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 HLA-DQB1P01920 261 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 BGLAPP02818 100 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 RBMS1P29558 406 aaKnown RBP10.46□□□□□ -0.73
UBR4-207ENST00000425413 CCR6P51684 374 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 CCL7P80098 99 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 NTRK2Q16620 822 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 HYAL4Q2M3T9 481 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 Q5BKY6 102 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 FCRLAQ7L513 359 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 MDGA2Q7Z553 956 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 ADGRG3Q86Y34 549 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 ZNF676Q8N7Q3 588 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 OR5AK2Q8NH90 309 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 ZNF417Q8TAU3 575 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 TRIM63Q969Q1 353 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
UBR4-207ENST00000425413 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
UBR4-207ENST00000425413 ZNF587Q96SQ5 575 aaPredicted RBP10.46□□□□□ -0.73
UBR4-207ENST00000425413 TMEM185BQ9H7F4 350 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 TAS2R10Q9NYW0 307 aa10.46□□□□□ -0.73
UBR4-207ENST00000425413 TRAV36DV7A0A075B6V5 113 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 H3BML4 177 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 MPZL1O95297 269 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 PDGFBP01127 241 aaPredicted RBP10.46□□□□□ -0.74
UBR4-207ENST00000425413 MT-ND4P03905 459 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 CFIP05156 583 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 SPARCP09486 303 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 SLC6A8P48029 635 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 NKAIN1Q4KMZ8 207 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 LINGO2Q7L985 606 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 CMTM4Q8IZR5 234 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 EXD3Q8N9H8 876 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 ARL5BQ96KC2 179 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 CHRNA10Q9GZZ6 450 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 PCED1AQ9H1Q7 454 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 SLCO1C1Q9NYB5 712 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 NPFFR2Q9Y5X5 522 aa10.46□□□□□ -0.74
UBR4-207ENST00000425413 SDK2Q58EX2 2172 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 TRAV1-2A0A0B4J238 106 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 A0A1W2PQM1 296 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 H0YC42 278 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 SIGLEC6O43699 453 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 SLC43A1O75387 559 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 UPK3AO75631 287 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 SCRG1O75711 98 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 SQSTM1Q13501 440 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 CBFBQ13951 182 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 C1orf140Q5VVS0 124 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 ARSKQ6UWY0 536 aa10.45□□□□□ -0.74
UBR4-207ENST00000425413 MAMDC2Q7Z304 686 aaPredicted RBP10.45□□□□□ -0.74
UBR4-207ENST00000425413 SIAH3Q8IW03 269 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms