RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 Q499Y3 187 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 SLC36A1Q7Z2H8 476 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 C10orf53Q8N6V4 93 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 OR51D1Q8NGF3 324 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 OR6M1Q8NGM8 313 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 OR5AK2Q8NH90 309 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 ADAD1Q96M93 576 aaKnown RBP12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
TPM3P9-201ENST00000424846 ANXA2P2A6NMY6 339 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ARPC3O15145 178 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 SMAD9O15198 467 aaKnown RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 SLC35E2P0CK97 266 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 CPN1P15169 458 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 AP3S2P59780 193 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 DMWDQ09019 674 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ALKBH1Q13686 389 aaKnown RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ALG11Q2TAA5 492 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 FAM122BQ7Z309 247 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 METTL27Q8N6F8 245 aaPredicted RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 EXD3Q8N9H8 876 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 WDR92Q96MX6 357 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 LMF2Q9BU23 707 aaKnown RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 TWSG1Q9GZX9 223 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 IGFLR1Q9H665 355 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 IKZF2Q9UKS7 526 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 PCOLCE2Q9UKZ9 415 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 SEC16AO15027 2179 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 NAP1L6A6NFF2 107 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ACOT7O00154 380 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 IGF2P01344 180 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ST6GAL1P15907 406 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 MST1P26927 711 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 DPY19L4Q7Z388 723 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 YAF2Q8IY57 180 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 MUC20Q8N307 709 aaPredicted RBP12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 CCDC74AQ96AQ1 378 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 ZNF337Q9Y3M9 751 aa12.9□□□□□ -0.34
TPM3P9-201ENST00000424846 MAOAP21397 527 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 CCR4P51679 360 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 CTXN1P60606 82 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 RAP2BP61225 183 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ZNF141Q15928 474 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 TMEM106AQ96A25 262 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ARL6Q9H0F7 186 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 PCNX3Q9H6A9 2034 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 EXOSC3Q9NQT5 275 aaKnown RBP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 POLE3Q9NRF9 147 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ERVK-19Q9WJR5 959 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 CLDN16Q9Y5I7 305 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 SLC22A23A1A5C7 686 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 GOSR2O14653 212 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 GPR143P51810 404 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 EGR4Q05215 589 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ILF3Q12906 894 aaKnown RBP eCLIP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 IL10RAQ13651 578 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 TMUB2Q71RG4 321 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ZNF550Q7Z398 422 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 OR51S1Q8NGJ8 323 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 C16orf52Q8NHV5 167 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 UTP23Q9BRU9 249 aaKnown RBP12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 PPM1BO75688 479 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 HIST1H2ABP04908 130 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 CA3P07451 260 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 RAB40ALP0C0E4 278 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 CALCBP10092 127 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 S100A11P31949 105 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 RAB38P57729 211 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 SLC35D3Q5M8T2 416 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ASPHD2Q6ICH7 369 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 HIST3H2AQ7L7L0 130 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 LRRC75AQ8NAA5 344 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 AVL9Q8NBF6 648 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 RAB40AQ8WXH6 277 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 HIST1H2ACQ93077 130 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 FAM131CQ96AQ9 280 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 C12orf10Q9HB07 376 aa12.89□□□□□ -0.35
TPM3P9-201ENST00000424846 ATG2AQ2TAZ0 1938 aa12.88□□□□□ -0.35
TPM3P9-201ENST00000424846 TRBV5-5A0A0J9YX44 114 aa12.88□□□□□ -0.35
TPM3P9-201ENST00000424846 SULT1B1O43704 296 aa12.88□□□□□ -0.35
TPM3P9-201ENST00000424846 DOK2O60496 412 aa12.88□□□□□ -0.35
TPM3P9-201ENST00000424846 ZMYND11Q15326 602 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms