RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PIK3C3Q8NEB9 887 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SLC30A7Q8NEW0 376 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 OR8B3Q8NGG8 313 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CIDECQ96AQ7 238 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 MAP6Q96JE9 813 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 NSUN5Q96P11 429 aaKnown RBP5.26□□□□□ -1.57
SDCBP-203ENST00000424270 OR8B2Q96RD0 313 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 STACQ99469 402 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 GPR22Q99680 433 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CPNE1Q99829 537 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 DESI2Q9BSY9 194 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 LINC00470Q9BZP3 86 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SLC19A3Q9BZV2 496 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 LRMDAQ9H2I8 198 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 PIGUQ9H490 435 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 B3GAT2Q9NPZ5 323 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 SH3BP4Q9P0V3 963 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CLN8Q9UBY8 286 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 GPR45Q9Y5Y3 372 aa5.26□□□□□ -1.57
SDCBP-203ENST00000424270 CENPVL1A0A0U1RR11 272 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 CENPVL3A0A0U1RRI6 287 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 KIR2DS1A0A191URI9 304 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 TMEM72A0PK05 275 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ETV2O00321 342 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 DNALI1O14645 258 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ENSAO43768 121 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 AKAP8O43823 692 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ANGPTL7O43827 346 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 OR4F21O95013 312 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 VAMP5O95183 116 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF205O95201 554 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 HMGN2P05204 90 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 KRT16P08779 473 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 FBP1P09467 338 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 UQCRBP14927 111 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 B4GALT1P15291 398 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF250P15622 560 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF43P17038 809 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 TNFRSF1AP19438 455 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 EFNA1P20827 205 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 CXCR1P25024 350 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 CRHR1P34998 444 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 GATA4P43694 442 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PITPNBP48739 271 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PDIA2Q13087 525 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ZMYND11Q15326 602 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 TBC1D28Q2M2D7 210 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 FAM153CQ494X1 144 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 SPATA46Q5T0L3 261 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 LETMD1Q6P1Q0 360 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 METTL2BQ6P1Q9 378 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 RPS27LQ71UM5 84 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 COMTD1Q86VU5 262 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 LRRC28Q86X40 367 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 SNX32Q86XE0 403 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PTOV1Q86YD1 416 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 KLBQ86Z14 1044 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 DDIASQ8IXT1 998 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 MIER2Q8N344 545 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ARFGAP2Q8N6H7 521 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 OR1J1Q8NGS3 322 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 RHEBL1Q8TAI7 183 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 METTL6Q8TCB7 284 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PPCDCQ96CD2 204 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 NEIL1Q96FI4 390 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 TECTBQ96PL2 329 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 RCHY1Q96PM5 261 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 NKX3-1Q99801 234 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 CITED2Q99967 270 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 DCTN5Q9BTE1 182 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ACPTQ9BZG2 426 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 BCL2L14Q9BZR8 327 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PIF1Q9H611 641 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 DUSP22Q9NRW4 184 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 CYSLTR2Q9NS75 346 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 DCAF16Q9NXF7 216 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 ZMAT5Q9UDW3 170 aaKnown RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 MIOXQ9UGB7 285 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 PCTPQ9UKL6 214 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 RASD1Q9Y272 281 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 POLR3HQ9Y535 204 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-203ENST00000424270 HERC2O95714 4834 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 SACSQ9NZJ4 4579 aa5.25□□□□□ -1.57
SDCBP-203ENST00000424270 IGLV3-9A0A075B6K5 115 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 LIPT2A6NK58 231 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 F5H0A9 414 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 RPL36A-HNRNPH2H7BZ11 118 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TM9SF1O15321 606 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 ZNF208O43345 1280 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 AKAP10O43572 662 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 SASH3O75995 380 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 IFI6P09912 130 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 CCDC159P0C7I6 412 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-203ENST00000424270 EPHA3P29320 983 aa5.24□□□□□ -1.57
SDCBP-203ENST00000424270 TACR3P29371 465 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms