RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TXNDC15Q96J42 360 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 LRR1Q96L50 414 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CDRT15Q96T59 188 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 EMC6Q9BV81 110 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 C1QTNF6Q9BXI9 259 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 ULBP2Q9BZM5 246 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 CRLF2Q9HC73 371 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 GPR35Q9HC97 309 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 MEPEQ9NQ76 525 aaPredicted RBP9.59□□□□□ -0.87
USP49-204ENST00000423567 A4GNTQ9UNA3 340 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 POFUT2Q9Y2G5 429 aa9.59□□□□□ -0.87
USP49-204ENST00000423567 A0A096LPE4 126 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 A0A1W2PPZ6 126 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 ZNF99A8MXY4 864 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 MCIDASD6RGH6 385 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 BCL10O95999 233 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 SAGP10523 405 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 IFI30P13284 250 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 ITGA2P17301 1181 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 CAPZA2P47755 286 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 NKX6-1P78426 367 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 ARF1P84077 181 aaKnown RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 CAMK2DQ13557 499 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 ZNF672Q499Z4 452 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 ZNF730Q6ZMV8 503 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 SLC46A3Q7Z3Q1 461 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 FITM2Q8N6M3 262 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 LRRC17Q8N6Y2 441 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 OR6X1Q8NH79 312 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 MAGEE2Q8TD90 523 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 BCL2L2Q92843 193 aaPredicted RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 ZNF566Q969W8 418 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 MCUR1Q96AQ8 359 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 BOD1Q96IK1 185 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 NSL1Q96IY1 281 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 NSMCE2Q96MF7 247 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 C20orf141Q9NUB4 165 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 DCAF13Q9NV06 445 aaKnown RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 TAS2R5Q9NYW4 299 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 CISD1Q9NZ45 108 aaKnown RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
USP49-204ENST00000423567 RHCGQ9UBD6 479 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 ADAM21Q9UKJ8 722 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 LAMP3Q9UQV4 416 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 SNX13Q9Y5W8 968 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 ENPP4Q9Y6X5 453 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 FREM1Q5H8C1 2179 aa9.58□□□□□ -0.88
USP49-204ENST00000423567 AKAP6Q13023 2319 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 CSMD1Q96PZ7 3565 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 ARPC4-TTLL3A0A0A6YYG9 625 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 B2RBV5 119 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 J3KTA2 159 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 ENTPD5O75356 428 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 IGHG1P01857 330 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 CALB2P22676 271 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 DAP3P51398 398 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 RPS4XP62701 263 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 RPL18Q07020 188 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 ANKDD1AQ495B1 522 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 SHEQ5VZ18 495 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 LINGO2Q7L985 606 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 NRMQ8IXM6 262 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 RNF113BQ8IZP6 322 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 SMAP2Q8WU79 429 aaPredicted RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 LIPHQ8WWY8 451 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 ACOT11Q8WXI4 607 aaPredicted RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 BPIFA2Q96DR5 249 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 SLC25A44Q96H78 314 aaPredicted RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 NDEL1Q9GZM8 345 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 ANKRD19PQ9H560 264 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 GORASP2Q9H8Y8 452 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 KRCC1Q9NPI7 259 aaPredicted RBP9.57□□□□□ -0.88
USP49-204ENST00000423567 INIPQ9NRY2 104 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 CSMD2Q7Z408 3487 aa9.57□□□□□ -0.88
USP49-204ENST00000423567 OTOGQ6ZRI0 2925 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 EFCAB9A8MZ26 197 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 SHISA9B4DS77 424 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 PIP5K1CO60331 668 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 CRYAAP02489 173 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 F13BP05160 661 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 H1F0P07305 194 aaKnown RBP9.56□□□□□ -0.88
USP49-204ENST00000423567 NR2C1P13056 603 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 RHCEP18577 417 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 AQP2P41181 271 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 SLC9A3P48764 834 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 CLRN1P58418 232 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 PRKCDQ05655 676 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 MELKQ14680 651 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 TAF11Q15544 211 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 ALG10Q5BKT4 473 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 FGD3Q5JSP0 725 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 Q5PR19 223 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 AGAP6Q5VW22 663 aa9.56□□□□□ -0.88
USP49-204ENST00000423567 NHLRC1Q6VVB1 395 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms