RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 PCYT1AP49585 367 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CLK1P49759 484 aaKnown RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CRISP3P54108 245 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 AQP5P55064 265 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 TPD52P55327 224 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 FAM27E3Q08E93 113 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SELENBP1Q13228 472 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 KEAP1Q14145 624 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SLC9B1Q4ZJI4 515 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 AGKQ53H12 422 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 AP1ARQ63HQ0 302 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SAXO2Q658L1 398 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 HEPHL1Q6MZM0 1159 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CBLN3Q6UW01 205 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 PLXDC2Q6UX71 529 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 LRRC74BQ6ZQY2 392 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 MSANTD1Q6ZTZ1 278 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 FCRLAQ7L513 359 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CDC20BQ86Y33 519 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 ZNF100Q8IYN0 542 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 UBE2J2Q8N2K1 259 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 METTL25Q8N6Q8 603 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 RELL2Q8NC24 303 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 OR6K3Q8NGY3 331 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 ROBO4Q8WZ75 1007 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 FIG4Q92562 907 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 TRIM63Q969Q1 353 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 DDIT4LQ96D03 193 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 MAELQ96JY0 434 aaKnown RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 TEX37Q96LM6 180 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 MAGEB18Q96M61 343 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 KLHL15Q96M94 604 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 OR5B2Q96R09 309 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SH3GL2Q99962 352 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 GPATCH1Q9BRR8 931 aaKnown RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 NAA11Q9BSU3 229 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 INPP5KQ9BT40 448 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CCDC28BQ9BUN5 200 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 TPT1P8Q9HAU6 139 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SDR39U1Q9NRG7 319 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-201ENST00000423442 RASSF1Q9NS23 344 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 ACER3Q9NUN7 267 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 TMEM45AQ9NWC5 275 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SELENONQ9NZV5 590 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 CCDC167Q9P0B6 97 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 EMC3Q9P0I2 261 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 KLHL9Q9P2J3 617 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 P2RX2Q9UBL9 471 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 RPS6KB2Q9UBS0 482 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 ZNF69Q9UC07 566 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 SLC13A4Q9UKG4 626 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 GPR52Q9Y2T5 361 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 IFT52Q9Y366 437 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 L3MBTL1Q9Y468 752 aa4.99□□□□□ -1.61
LINC00458-201ENST00000423442 MXRA5Q9NR99 2828 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 CFAP73A6NFT4 308 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 AGAP5A6NIR3 686 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 C17orf51A8MQB3 221 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 NPIPB9F8W1W9 429 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 ANGPT2O15123 496 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 EIF1BO60739 113 aaKnown RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 SERPINB7O75635 380 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 UGT2B17O75795 530 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 ALDOCP09972 364 aaKnown RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 TROVE2P10155 538 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 CCNA2P20248 432 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 IL12AP29459 219 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 UGT2B10P36537 528 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 POLR2HP52434 150 aaKnown RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 DSTNP60981 165 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 SLC35A1P78382 337 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 RASGEF1BQ0VAM2 473 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 FOXF1Q12946 379 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 FADDQ13158 208 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 SKP2Q13309 424 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 P2RY6Q15077 328 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 CD226Q15762 336 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 TOMM34Q15785 309 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 SYPL1Q16563 259 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 TMEM44Q2T9K0 475 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 DEFB113Q30KQ7 82 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 MIDNQ504T8 468 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 ZNF311Q5JNZ3 666 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 METTL21CQ5VZV1 264 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 TMEM225Q6GV28 225 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 TYW3Q6IPR3 259 aaKnown RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 C3orf33Q6P1S2 294 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 ZNF550Q7Z398 422 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 GRINAQ7Z429 371 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 STEAP2Q8NFT2 490 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 OR52P1PQ8NH57 321 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 PNPT1Q8TCS8 783 aaKnown RBP4.98□□□□□ -1.61
LINC00458-201ENST00000423442 ZFP90Q8TF47 636 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 WDR60Q8WVS4 1066 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 CKAP2Q8WWK9 683 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 VPS33AQ96AX1 596 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 R3HDM4Q96D70 268 aa4.98□□□□□ -1.61
LINC00458-201ENST00000423442 MUCL1Q96DR8 90 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms