RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TSPAN32Q96QS1 320 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 CIB1Q99828 191 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 EMC6Q9BV81 110 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 POLDIP3Q9BY77 421 aaKnown RBP15.04■□□□□ -0
COL7A1-202ENST00000422991 PLA2G12AQ9BZM1 189 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 TXNIPQ9H3M7 391 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 DCLRE1BQ9H816 532 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 SMURF2Q9HAU4 748 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 IL20Q9NYY1 176 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 REV1Q9UBZ9 1251 aa15.04■□□□□ -0
COL7A1-202ENST00000422991 SLC35F4A4IF30 521 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 PDLIM1O00151 329 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 SOX14O95416 240 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 BCL10O95999 233 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 IGFBP1P08833 259 aaPredicted RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 ASCL1P50553 236 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 RPL27P61353 136 aaKnown RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 ERVK-25P63136 954 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 PPP2R2BQ00005 443 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 TOP3AQ13472 1001 aaPredicted RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 ARMC4Q5T2S8 1044 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 KDM4DQ6B0I6 523 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 DPY19L2P2Q6ZN68 376 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 FAM122BQ7Z309 247 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 HDDC2Q7Z4H3 204 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 OR6X1Q8NH79 312 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 ZNF519Q8TB69 540 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 ADAD1Q96M93 576 aaKnown RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 OSBPL10Q9BXB5 764 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 SLCO5A1Q9H2Y9 848 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 NRIP3Q9NQ35 241 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 PAPOLBQ9NRJ5 636 aaKnown RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 STX18Q9P2W9 335 aaKnown RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 PRSS50Q9UI38 385 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 TMEFF2Q9UIK5 374 aaPredicted RBP15.03■□□□□ -0
COL7A1-202ENST00000422991 POFUT2Q9Y2G5 429 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 ADAM18Q9Y3Q7 739 aa15.03■□□□□ -0
COL7A1-202ENST00000422991 A8MXE2 369 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 SLC43A1O75387 559 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 CLDN14O95500 239 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 PPP1R3DO95685 299 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 FBXL19-AS1Q494R0 122 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 SLC36A3Q495N2 470 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 FAM205BPQ63HN1 556 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 ZNF474Q6S9Z5 364 aaPredicted RBP15.02■□□□□ -0
COL7A1-202ENST00000422991 LUZP2Q86TE4 346 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 PARP8Q8N3A8 854 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 ZNF610Q8N9Z0 462 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 OR52L1Q8NGH7 329 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 SLC25A44Q96H78 314 aaPredicted RBP15.02■□□□□ -0
COL7A1-202ENST00000422991 RBM4BQ9BQ04 359 aaKnown RBP15.02■□□□□ -0
COL7A1-202ENST00000422991 C9orf16Q9BUW7 83 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 RBM4Q9BWF3 364 aaKnown RBP15.02■□□□□ -0
COL7A1-202ENST00000422991 KRT84Q9NSB2 600 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 TBC1D23Q9NUY8 699 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 MALT1Q9UDY8 824 aa15.02■□□□□ -0
COL7A1-202ENST00000422991 RRP15Q9Y3B9 282 aaKnown RBP15.02■□□□□ -0
COL7A1-202ENST00000422991 ALPK2Q86TB3 2170 aa15.02□□□□□ -0.01
COL7A1-202ENST00000422991 NKX2-6A6NCS4 301 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 OR6C65A6NJZ3 312 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF726A6NNF4 738 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 EI24O14681 340 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 CNOT4O95628 575 aaKnown RBP15.01□□□□□ -0.01
COL7A1-202ENST00000422991 TXNDC12O95881 172 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 IGHV3-9P01782 118 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 PGA4P0DJD7 388 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 PGA3P0DJD8 388 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 OSMP13725 252 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 APEHP13798 732 aaKnown RBP15.01□□□□□ -0.01
COL7A1-202ENST00000422991 IGFBP5P24593 272 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 SDHAP31040 664 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 RUNX1T1Q06455 604 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 LGALS3BPQ08380 585 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 CAMK2DQ13557 499 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 DAG1Q14118 895 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 CLEC12AQ5QGZ9 265 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 TSPO2Q5TGU0 170 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 CARD17Q5XLA6 110 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 FBXW9Q5XUX1 488 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 GPR139Q6DWJ6 353 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 Q6ZT83 130 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 C20orf196Q8IYI0 205 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 CBR4Q8N4T8 237 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 POMGNT2Q8NAT1 580 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 Q96M85 177 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF570Q96NI8 536 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 IFT27Q9BW83 186 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 LINC00470Q9BZP3 86 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 RNPEPL1Q9HAU8 725 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 KCNJ16Q9NPI9 418 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 SLC7A10Q9NS82 523 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 USE1Q9NZ43 259 aa15.01□□□□□ -0.01
COL7A1-202ENST00000422991 NKX1-2Q9UD57 310 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-202ENST00000422991 FOXD3Q9UJU5 478 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF346Q9UL40 294 aaKnown RBP15.01□□□□□ -0.01
COL7A1-202ENST00000422991 HCFC1P51610 2035 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ICE1Q9Y2F5 2266 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ADGRG4Q8IZF6 3080 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 TEX13CA0A0J9YWL9 993 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 A6NIZ1 184 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms